Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1655g00001 ATGGCTTATAAAATTCGGTTTAGTAATTTTGGTGATGCTGCTATTGTTTCTGGGTTTTTATCTCGAGTCAGAAACCAGAAAACTCAATGCGAACCGGAAAACACAAATGGGTATTACACTGTGGTTGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTATGAGTGGATGGTAGGGGTGAAAGGAGCAATCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACGAAGAGGAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTGAACCCGGGTTACACAACTTTATTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAGCCCTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAATACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTCGCCTTGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGAGGAGCAAGGGTTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAGAATGGGCACCTTTGATGAGAACTATCCCAAGTCTCCCACTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGCAGATTGTGGCAGAGATAGATGTTGCTGGTGATGATGTGCATGTGATGAAATCAAGGCTCGGATGA 723 0.4661 MAYKIRFSNFGDAAIVSGFLSRVRNQKTQCEPENTNGYYTVVVDCGSTGTRVNVYEWMVGVKGAIKGNLPVLLHSYPDNTTKRSSLWKGSCQYHCMQTEPGLHNFINDSLGVRQALEPLIVWAEQVVPREMRGNTPAFVLATAGLRGLALEDADRVLGDIEAVVKGHSFMRSKGWIRVLSGKEEAYYGWVALNYRMGTFDENYPKSPTLGLVDIGGSSLQIVAEIDVAGDDVHVMKSRLG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1655g00001 240 Pfam GDA1/CD39 (nucleoside phosphatase) family 33 226 IPR000407 GO:0016787
Vium1655g00001 240 Gene3D Exopolyphosphatase. Domain 2 180 240 - -
Vium1655g00001 240 Gene3D - 25 178 - -
Vium1655g00001 240 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 20 226 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1655g00001 Vium-Chr1655 27251 29776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1655g00001 39 240 Nodulin-like Gene Family AT4G19180 37.129 5.40e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1655g00001 - - vum:124827386 493.041