Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1652g00034 ATGGCAAAGAGGTCACAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCTCGATTTACTCGGAAGTTGATAGCAGATAAGAGGCATGGAAGCAAGCATGCTTTTGGTGCGCCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGGTGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATCACTGACCAAGATGAAATAAAGGATCAAGATAACGTGGAAGTGGAATCAAAGCAATCCAGATTAGGGCGTGATGAACCCCAGAAGACAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAACCATGATTTGAAATCAGATGCAACCTTGAAATCAGAGTTTTCACATAAGAAGCATTCAAGGGAACAGTCAAAAGATACTATAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCTACTTATTCCATGATGTTTGACAATGATGGAAAAATTGACGCGCAGTCAAACCAAAAGAATGTAATGTATGAAAACCTTGATAATGCAATCCATGAATTTGTGAATCAGATGAGATTGAATGGGAAAGATATGCATGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTATCTTAAACTTCTACAAGACCCAAATTCGCACTTGCTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGCCTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGTAAGCATCTTAACTTTTTCAAGAAAAGGGGAAAGTCTCAATCAAAAGATCTGACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACTGACATTCAAATTTCTGAAAGTGAAAGCAACCTTGACTCAATGCTAGATTCTCGTGATGTTTCCAATTACAAAGGTCCTTCTGTGAGAGTTGGTTCACATTTTTCTCTTACAGAGATAAAAAGAAAATTGAAACATGCCATGGGAAAGGAGAGACATGGAAACCCTGAAGTAATCCCACGAAAGCTCCCTGTTGAACGTCAAAATAAGTTGGCAAGAGGCAAATGCAAAGATAATACTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAGATTGCTAGACCAATGTTTGATGTCATGAAGGGAAACAAGACTGATACACTGAAGGACTCTGAAATGATCGTAGAACAAGAAAGTGGTATTCCCAAGCTTAGTGCTTCTAGCTTATATGTTGAGGCAAGGAAACATCTGTGTGAGATGTTAGATAATGGTGATGAAAACACAAACATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAGAATACTTTCTTTTCCCGAGTACAACTTTTCACCTGTAGAAAGTCCTGGAAGGGATTTTGAGCATCATTCTGTGACTGCACAGGCAATATCTTCTCCCTCTGGAAAAACTAGGGAAGTTAGTGAGGATATTTCCTCCCCAGAACCAGCAACCTCAGTTGGTTTTCCAGCTCAGGAAACTAACAATTCAGAAGAGAAGTCATACGTTTGTGATGGAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTGTCAAATTTCTCCAGTGATGTTGGTCCTGTTGATACATTTGAAGTCTGTTGTCCTATTAGAGATGTGACAGTCACTGAAGACAATGTTGAACCTGCAGAAGAGAAAAATGGGTTGGAATCAGATCTGAATGGCTTCATCGTAGGACAGGACCAAAAAATTGATATCTCAGAAACTCCTGATGGTGCAAAATGTTCTGGATGTTTGAATCAGGATGAGGATATAACAGAAGAGAACCAACTATCATCTCTACCGACATCTCCTAACTCTTTGATCTCTAAGAAAAATGAAGAGGTGGAACGCGGTATAGATTTATCTGGGGGACCGAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTCTGGAAACTCCAGATGTCAACCTGTTAACTTACAAGTACAACCTCTACAAATTCAATTTGAAGAACACGAGTCTTCACCAGCTGAAGAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATATATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGATCAGTTGTTGGTGAAATGCCTTACCTCTGACAAAATACTAGATCCTTCCCTCTTTGATCAGGTAGAGTTCTTCTCCAACCTGCTTTGCCACGACCAGAAGCTCCTATTTGAATCTATCAATGAGGTCCTGATGGAGGTTTGTCAGCATTATTTTGGGGTCTCACCTGGTGTCTCATTAGCAAACCCTTGCATGAGGGCAGCACCAAGTATGAAAAGGCTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACTTGGATGGACCTTGAACTTGATGCTGAAACAATTGGTTTTGAAATGGGGGAGGCCATTCTTACTGAACTGATGGAAGACACGATTTTGAGTCTTGTGAGTGAAAGTTCAGTAAGTATTTAA 2760 0.3935 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAFGAPLTKNKFEVLSNLGENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMITDQDEIKDQDNVEVESKQSRLGRDEPQKTDSKRKKKSRKKNHDLKSDATLKSEFSHKKHSREQSKDTIDLDKIMDDFCHVEATYSMMFDNDGKIDAQSNQKNVMYENLDNAIHEFVNQMRLNGKDMHEDGQFLSSRELMEALQVISSDKQLYLKLLQDPNSHLLKYIQELENAQGRDGKECSSLTASNCSELELVSLKQTRENTNRKHLNFFKKRGKSQSKDLTNENGKTEFSNRIVILKPALTDIQISESESNLDSMLDSRDVSNYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKLARGKCKDNTGMRSPNKDHFFIEKIARPMFDVMKGNKTDTLKDSEMIVEQESGIPKLSASSLYVEARKHLCEMLDNGDENTNISSRQIPKTLGRILSFPEYNFSPVESPGRDFEHHSVTAQAISSPSGKTREVSEDISSPEPATSVGFPAQETNNSEEKSYVCDGISNNKVQEIKPVSNFSSDVGPVDTFEVCCPIRDVTVTEDNVEPAEEKNGLESDLNGFIVGQDQKIDISETPDGAKCSGCLNQDEDITEENQLSSLPTSPNSLISKKNEEVERGIDLSGGPSPVSVLDTSFSDDDSGNSRCQPVNLQVQPLQIQFEEHESSPAEEFDTGKYSFGENELIYDYIKVVLHASGLTRDQLLVKCLTSDKILDPSLFDQVEFFSNLLCHDQKLLFESINEVLMEVCQHYFGVSPGVSLANPCMRAAPSMKRLTFKVWEGVCWHVLPLPPPRTLEQIVRKDMARRGTWMDLELDAETIGFEMGEAILTELMEDTILSLVSESSVSI 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1652g00034 919 MobiDBLite consensus disorder prediction 106 167 - -
Vium1652g00034 919 MobiDBLite consensus disorder prediction 143 167 - -
Vium1652g00034 919 MobiDBLite consensus disorder prediction 106 132 - -
Vium1652g00034 919 MobiDBLite consensus disorder prediction 528 571 - -
Vium1652g00034 919 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
Vium1652g00034 919 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 911 - -
Vium1652g00034 919 MobiDBLite consensus disorder prediction 532 571 - -
Vium1652g00034 919 Pfam Domain of unknown function (DUF4378) 759 906 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1652g00034 Vium-Chr1652 226220 232575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1652g00034 1 894 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.373 9.22e-96 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1652g00034 - - gmx:100782204 1396.33