Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1646g00024 ATGAGCTCAGATGCGAGTAGAGAACGAGGTGCATCAACCGTGGTAGAGCGGAAATTTCAATGTAGAACACTTTTGTTTTTGGCATACCAAAGTTTTGGCTTTTTGTTTGGTGACTTGAGCCTATCCCCACTTTATGTTTATCAAAGTATTTTTTCTGGAAGACTAAAACCAGTCCAGAATGAAGATGCAATATTTGGCGCATTTTCTTTGATATTTTGGACTGTTTCAATTGTTTCTTTATTGAAGTATTCAGTTATTCTTTTAAGTGTAGATGATAATGGCGAAGGGGGAATTGTTGCTTTGTATTCACAGCTTTGCAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCGGATGAGGAGCTTTCTACATATCTCAAACTTGGTTCCTCAAATAGAATACCACCATCTCCTTTGAAAAGATTCATTGAGAAACACAAGAGTACAAAGAAGGCTTTGCTTATTTTTGTTTTACTGGGTGCTTGCATGGTAATTTGTGTTGGTGCACTCATGCCTGCCATTTCTGTTCTTTCATCCATTAAAGGCCTGGAAATTGAAGCAAAGATTACAAACAAAAGTGTGCTGTCTCGTATTTCCTGTGTTCTAGTGATTGGACTCTTTGTTATGCAACACCGTGGCTCCTACAAGGTTGCATTTGTATTTCCTCCCATAATCATTCTATGGTTACTTACTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAACCCACGAGTATATGGGGCTCTTTCTCCGCACTATATTTACAAGTTCTTTAGGCTAACAGGAAAAGGTGGTTGGGTTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGGAGACCTTGGTTACTACAGACAAATACCTTTGAGGGTTGCATTTTATTGTGTCATTTACCCATGTTTAGTTCTTCAATACATGGGGCAGGCTGCTTTTCTTTCCAAGAATTTATCTGCAGTGCATATAAGCTTTTATGCTTCTATTCCAGATGTTCTATTTTGGCCAGTATTTGTGGTGTCTGCTTTGGCGGCAGTAGTTTCAAGTCAGGCTGTCATTGCTTCAGCATTCTCAACAGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGAGTTAAGGTTGTGCATTCCAGAAGGTGGATCCCTGGCCAGACATATATACCAGAGATAAACTGGATTCTTATGATAATAAGCTTGGCTGTGACAGTTGGTTTAGGAGACATAAACAGAATAGGACATGCTTATGGAATTGCACATCTGATTCTTGTGTTTGTGACCACATGTTTGACATCACTAGCCATCATCCTTGTATGGAATCAAAGTCTTATAATTGCTCTGGCGTTTGCTTTATCCTTTGGTTCGATAGAGATTCTCTTCCTGTCATCATATAGCCTGAAAATCCTTAAAGGTGGCTGGATTCCACTCGTGCTTTCTGCAGTCTTCATGGTTGTAATGTATGCGTGGCATTATGGTTCCAGGAAAAAGTATTTATTTGACACGCATAACAAAGTTTCAACGAGGACCATCCTAGCATTAGGTCCTAGTCTTGGGATTGTTAGAGTTCCTGGAATGGGCCTTATCTACACTGGATTGGCTACTGGAATCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGGCTCGTGTGCGACGTGAGGAACGTTACCTCATTGGTCGAATTGGTCCCAAATCTTACCGGTTGTATCGATGCATTGTCCGAAATGGTTATAAAGATGTGTGCAATCACGAAAATTATTCTGAAAATGATTTTGAAAATGAACTGGTGATGAGCATAGCTGAATTCATTCAATTGGAAGCAGAAGGTTGCTCTGGAAAGGCAGAAGGTTCAGCGGATGGACGGATGGCGGTGGTGAGAACATCAGGGAAGTTTGGGACACGATTGCTGATGTCGGAATCTTCTTCTTTTCAGGAAGGCAACAATATTAATCTTCCGGGAGCTTTGACCGTTACTAGCAGTAAATCTCCAATATTGAAGAGGCTGCAGGCCATGTATGAGCGGGAATCGCCTGAACACATCACTAGACCACGAATTCGATTTGAGTTGCAAAATGTAATATATAATGACCCACGGGTCAAGGAAGAACTCATGGAACTGGTAGAAGCCAAGTGCACTGGAGCAGCGTATGTAATTGGGCATTCTAACGTGAAGGCCAACTGGAACTCATCATTTATAAAGAAGTTTGCTATCGACCTCTACTCTTTTCTCCGGAAAAATTGTCGGGCCCCTGTTGTAGGACTAAACATTCCTTCGATTTCTCTGATTAAGGTAGGAATGAATTACCATGTGTAG 2382 0.4064 MSSDASRERGASTVVERKFQCRTLLFLAYQSFGFLFGDLSLSPLYVYQSIFSGRLKPVQNEDAIFGAFSLIFWTVSIVSLLKYSVILLSVDDNGEGGIVALYSQLCRNAKFCLLPNHQASDEELSTYLKLGSSNRIPPSPLKRFIEKHKSTKKALLIFVLLGACMVICVGALMPAISVLSSIKGLEIEAKITNKSVLSRISCVLVIGLFVMQHRGSYKVAFVFPPIIILWLLTIFMIGIYNVIKWNPRVYGALSPHYIYKFFRLTGKGGWVNLGGVFLCVTGTEAMFGDLGYYRQIPLRVAFYCVIYPCLVLQYMGQAAFLSKNLSAVHISFYASIPDVLFWPVFVVSALAAVVSSQAVIASAFSTVQQCHAFECFPRVKVVHSRRWIPGQTYIPEINWILMIISLAVTVGLGDINRIGHAYGIAHLILVFVTTCLTSLAIILVWNQSLIIALAFALSFGSIEILFLSSYSLKILKGGWIPLVLSAVFMVVMYAWHYGSRKKYLFDTHNKVSTRTILALGPSLGIVRVPGMGLIYTGLATGIPASFTHFLTNLPAFYQVVVFVCVKTVPVARVRREERYLIGRIGPKSYRLYRCIVRNGYKDVCNHENYSENDFENELVMSIAEFIQLEAEGCSGKAEGSADGRMAVVRTSGKFGTRLLMSESSSFQEGNNINLPGALTVTSSKSPILKRLQAMYERESPEHITRPRIRFELQNVIYNDPRVKEELMELVEAKCTGAAYVIGHSNVKANWNSSFIKKFAIDLYSFLRKNCRAPVVGLNIPSISLIKVGMNYHV 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1646g00024 793 NCBIfam potassium uptake protein 27 793 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1646g00024 793 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1646g00024 793 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1646g00024 Vium-Chr1646 248458 257315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1646g00024 14 793 Inorganic Solute Cotransporters AT4G23640 58.365 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1646g00024 K03549 - gmx:100819743 1330.47