Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1635g00006 ATGTCGTTCAAAACAGTTAGCGTCACCGCTGCTCCCTATGGTTCATGGAAATCCCCCATCACCGGCGACACTGTCTCCGGTGCCACCAAGGACCTGGGCGGCACCGCCGTGGATGGTCGCGGCCGCCTCATTTTGCTGGAATTCCGTCCATTAGAATCAGGGCGTGGAGTTCTTGTTCTTGAGCCAGAAACAACAGGAGGTGAGTCTGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGCGCTGCTTTTACTGTTTCTGGGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGGTTGTACAAGCAGTCCATCACTTCTCTGGATGAGCCTCCTTTACCACTCACTCCGGATTATGGTGGACCTGTAGTCAGCTATGCTGATGGAATATTGGATGCACGATTTAACCGTTTTCTTTGTGTTAGGGAAGATCGTCGTGAAAGCAGTCTAAATCCACCTACAACTATTGTATCCATAGCACTTGGCAGCAAAGATGTTCAGGAACCAGTTGTTCTAGTTGGTGGGAGTGACTTCTATGCCTACCCACGTCTAGATTCTAAAAGTGAGAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCATGGGACAAAACAGAACTTTGGGTTGGCTATATTTCTGAAAATGGTGAGATCTACAAACGTGTTTGTGTTGCTGGGCATGATCCTTCACTTGTGGAGTCTCCAACTGAACCCAAGTGGTCCTCTGAGGGGGAGTTGTTTTTCATCACAGATAGAGAAAATGGTTTTTGGAATCTCCACAAATGGATTAAGTCTGAGAATAAGGTCGTGTCAGTTTATTCTTTAGAAGCTGAGTTTACAAGGCCACTCTGGACGTTTGGTGTGAATTCTTATGAATTTGTTCAAAGTTCTAAACAGTTAATTGCTTGCAGTTACAGGCAGCATGGAAAGTCATATCTGGGTATTGTTGATGTAGAGGGCTCAAAGCTAACTGTGATTGATTTCCCTTGCACGGACATAAATAACATAACATCTGGTAATGATTTCTTGTACGTGGAGGGAGCATCTGAGGTTCTTCCATCATCAGTGGCCAAGGTGACTTTTGATGATGATAAATCAAAAGCAGTGGATTTCAATATTATCTGGTCCTCATCACCAGATAGTCTAAAGTATAGCTCATACATCAGTAAGCCAGAGTTGATTGAATTCCCAACTGCCGTTCCTGGTCAAAATGCTTATGCATACTTTTACCCACCATCTAATCCTGATTTCCAAGCTAGTGAAGAAGAAAAGCCTCCACTGTTATTGAAGAGTCACGGTGGCCCAACTCAAGAAACTCGTGGAATTTTAAATTTGAGCGTTCAGTACTGGACTAGCCGAGGTTGGGCAGTCGTTGATGTTAATTATGGGGGAAGCACTGGTTATGGCAGGGCATACAGAGAACGACTTTTGAGACAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACATATTTGGTGGAGAGTGGAAAGGTGGATAAGGAGAGGCTGTGTATAATGGGTGGCTCTGCTGGTGGGTATACCACCTTGGCAGTTCTTGCTTTCAGAAATACTTTTCAGGCTGGTGCTTCTTTGTATGGAATAGCTGACTTGAATTTGTTGAGAGCAGAAACTCATAAGTTTGAATCCCATTATGTTGAAAATCTAGTTGGAGGTGATAAGGAGATGTATGAAAGATCTCCTATTAATCATGTTGATGATTTTTCTTGTCCCATTATAATATTTCAAGGATTGGAGGACAAGGTTGTGCCACCGGATCAAGCTGAAAAAATATACCAGGCAGTGAAGGAGAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGGGAACAACACGGTTTCCGAAAGGCTGAGAACATTAAGAATACAATTGAACAAGAAATGGTATTCTTTGCACGATTGATTGGGCACTTTGATGTTGCTGATGATATTACTCCTATCAAAATTGACAACTTTGATTGCTAA 2019 0.4309 MSFKTVSVTAAPYGSWKSPITGDTVSGATKDLGGTAVDGRGRLILLEFRPLESGRGVLVLEPETTGGESVDITPKEFGVRTLAQEYGGAAFTVSGDVVFFANYNDQRLYKQSITSLDEPPLPLTPDYGGPVVSYADGILDARFNRFLCVREDRRESSLNPPTTIVSIALGSKDVQEPVVLVGGSDFYAYPRLDSKSERIAWIQWNHPNMPWDKTELWVGYISENGEIYKRVCVAGHDPSLVESPTEPKWSSEGELFFITDRENGFWNLHKWIKSENKVVSVYSLEAEFTRPLWTFGVNSYEFVQSSKQLIACSYRQHGKSYLGIVDVEGSKLTVIDFPCTDINNITSGNDFLYVEGASEVLPSSVAKVTFDDDKSKAVDFNIIWSSSPDSLKYSSYISKPELIEFPTAVPGQNAYAYFYPPSNPDFQASEEEKPPLLLKSHGGPTQETRGILNLSVQYWTSRGWAVVDVNYGGSTGYGRAYRERLLRQWGIVDVNDCCSCATYLVESGKVDKERLCIMGGSAGGYTTLAVLAFRNTFQAGASLYGIADLNLLRAETHKFESHYVENLVGGDKEMYERSPINHVDDFSCPIIIFQGLEDKVVPPDQAEKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKNTIEQEMVFFARLIGHFDVADDITPIKIDNFDC 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1635g00006 672 SUPERFAMILY alpha/beta-Hydrolases 400 652 IPR029058 -
Vium1635g00006 672 Gene3D alpha/beta hydrolase 392 659 IPR029058 -
Vium1635g00006 672 SUPERFAMILY Tricorn protease domain 2 86 353 - -
Vium1635g00006 672 Pfam Prolyl oligopeptidase family 455 654 IPR001375 GO:0006508|GO:0008236
Vium1635g00006 672 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 8 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1635g00006 Vium-Chr1635 65256 74069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1635g00006 8 671 Carbohydrate Esterase AT5G36210 71.214 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1635g00006 - - gmx:100794040 1269.99