Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1626g00002 ATGCAGACGAGGTACATGGAGAAATCGAGCAGCGCGGCGAGGGGGAAGCGCCGCTTAGATTCAGGCTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTTGCTAGCGTTATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTGTTAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGTCAAGCTTAGTGGAAGGTCTTCTCCCAAGAGCATAGAAGGCCCTATTGACAGCAGTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGACGGAGAGCATGGCAGCGCCATACACTTTGTTTTGATTGATACAATAACAGGCCATGTTGTTACATCTGGCCCAGCTTCGTGTGTCAAACTAGACGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATAATTGGAGTGAAGAAGATTTTGACAGTCACGTAGTTAAAGAGCGGGAAGGAAAAAGACCTCTTCTGGCTGGTGATCTGCAAGTGACGCTGAAGGAGGGTGTAGGAACATTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGTTAAATAAAGCGGGAGTATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGTGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCAGACAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAGTGCCAATCAGAATATGACTTTGGGCACCTCCCATCCTCTAGCTGCAGGGGGTTCCCATGATTATTCAATTTCAAACTCCCTTGATCAGCAGACCTGCATCCCAAGTCTACCAGTTCCTGCAACTACTGGGCAGCCTTCAATGGATCCAGCCATAGCAGTCGGAGGTTATCATAATGTGACGACTACCAGATCCTCAATGCAACCACAGAATGACAATCTTCATTCTTCTATTCAGTTTGATAACACACTCCCACTGCAAAACCAGTTACTGAATGCTTCACACCAATCTCAACTTCCTAGAAATGAAAATGAGATGACTCTTGGTTCACGACAACCAGCTACTCCGGGCTTTCAAAGTGTCGGCATTTCAAATCCTAGTTATAGAGGATTTGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAGCATTTGCTTCGTATATTTAATATGGGAGGCGGGCAATCCCATGCTTCCTTCAATACCCCAGAAGATGCATACCCTTATCCATCATCTACTTACATGCCTGCGACCTCCATGAGCTACCACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCCGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCGTAG 1908 0.4471 MQTRYMEKSSSAARGKRRLDSGSTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPVKLSGRSSPKSIEGPIDSSLQLQFRNRLSLPLFTGGKVDGEHGSAIHFVLIDTITGHVVTSGPASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLSANQNMTLGTSHPLAAGGSHDYSISNSLDQQTCIPSLPVPATTGQPSMDPAIAVGGYHNVTTTRSSMQPQNDNLHSSIQFDNTLPLQNQLLNASHQSQLPRNENEMTLGSRQPATPGFQSVGISNPSYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGGQSHASFNTPEDAYPYPSSTYMPATSMSYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1626g00002 635 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Vium1626g00002 635 MobiDBLite consensus disorder prediction 1 33 - -
Vium1626g00002 635 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Vium1626g00002 635 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Vium1626g00002 635 PANTHER OS02G0177800 PROTEIN 14 548 IPR012416 GO:0005516
Vium1626g00002 635 MobiDBLite consensus disorder prediction 10 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1626g00002 Vium-Chr1626 9128 14766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1626g00002 14 630 Calmodulin-binding Proteins AT5G57580 59.288 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1626g00002 - - gmx:100802994 1143.26