Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1626g00001 ATGCAGACGAGGTACATGGAGAAATCGAGCAGCGCGGCGAGGGGGAAGCGCCGCTTAGATTCAGGCTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTTGCTAGCGTTATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTGTTAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGTCAAGCTTAGTGGAAGGTATTACTTTGTCACTTCAAGGTCTTCTCCCAAGAGCATAGAAGGCCCTATTGACAGCAGTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGACGGAGAGCATGGCAGCGCCATACACTTTGTTTTGATTGATACAATAACAGGCCATGTTGTTACATCTGGCCCAGCTTCGTGTGTCAAACTAGACGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATAATTGGAGTGAAGAAGATTTTGACAGTCACGTAGTTAAAGAGCGGGAAGGAAAAAGACCTCTTCTGGCTGGTGATCTGCAAGTGACGCTGAAGGAGGGTGTAGGAACATTGGGTGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGTTAAATAAAGCGGGAGTATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGTGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCAGACAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAGTGCCAATCAGAATATGACTTTGGGCACCTCCCATCCTCTAGCTGCAGGGGGTTCCCATGATTATTCAATTTCAAACTCCCTTGATCAGCAGACCTGCATCCCAAGTCTACCAGTTCCTGCAACTACTGGGCAGCCTTCAATGGATCCAGCCATAGCAGTCGGAGGTTATCATAATGTGACGACTACCAGATCCTCAATGCAACCACAGAATGACAATCTTCATTCTTCTATTCAGTTTGATAACACACTCCCACTGCAAAACCAGTTACTGAATGCTTCACACCAATCTCAACTTCCTAGAAATGAAAATGAGATGACTCTTGGTTCACGACAACCAGCTACTCCGGGCTTTCAAAGTGTCGGCATTTCAAATCCTAGTTATAGAGGATTTGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAGCATTTGCTTCGTATATTTAATATGGGAGGCGGGCAATCCCATGCTTCCTTCAATACCCCAGAAGATGCATACCCTTATCCATCATCTACTTACATGCCTGCGACCTCCATGAGCTACCACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCCGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCGTAG 1929 0.4458 MQTRYMEKSSSAARGKRRLDSGSTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPVKLSGRYYFVTSRSSPKSIEGPIDSSLQLQFRNRLSLPLFTGGKVDGEHGSAIHFVLIDTITGHVVTSGPASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLSANQNMTLGTSHPLAAGGSHDYSISNSLDQQTCIPSLPVPATTGQPSMDPAIAVGGYHNVTTTRSSMQPQNDNLHSSIQFDNTLPLQNQLLNASHQSQLPRNENEMTLGSRQPATPGFQSVGISNPSYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGGQSHASFNTPEDAYPYPSSTYMPATSMSYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDP 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1626g00001 642 PANTHER OS02G0177800 PROTEIN 14 555 IPR012416 GO:0005516
Vium1626g00001 642 MobiDBLite consensus disorder prediction 10 32 - -
Vium1626g00001 642 Pfam Calmodulin binding protein central domain 263 329 IPR046830 -
Vium1626g00001 642 Pfam Calmodulin binding protein C-terminal domain 334 396 IPR046829 -
Vium1626g00001 642 Pfam Calmodulin binding protein-like N-terminal domain 104 251 IPR046831 -
Vium1626g00001 642 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1626g00001 Vium-Chr1626 9128 14769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1626g00001 14 637 Calmodulin-binding Proteins AT5G57580 58.986 0.0 742