Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1624g00001 ATGAAGAAGGTCACAACAATTGTTTCAATCTTTTTGATCGCGCTACTTTGTTTGCAGGAACTCGTTCACGTATCTTCGTCACCATTCTTATACGCACGCCAGGTCTATGAGGAATCTTCTGGTGGAAGGAAACTTGAACAGGAACAGGGACAAGAACATGATCAAGAATTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGTATTTGATACCATTTGTGGAACGAGAAAACTACCGGCTTTCAACTAAATGCAGACTTCACCCTGAAAATGATATATTTAGCGATCAGGAAGAGCATAAAATATTCATAGATAGACATGAATGGCAGTGTGGATATTGTAAGAAAAGCTTTCGGGAAGAGAAATTTCTAGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATGTGAGTCATGGTAAATGCTTGGCTGATTTATGTGGTGCGATGCATTGTGATGCTGTGACGAATTTCAGATCCCCCAGAAGCAAATGTAATCTAGCAGCTGCTGCAAGAAATCGTCATCTATGTGAGAGTCTTGCTGACAATTGTTTTCCTATAAGTGATGGTCCAGCAGCAGGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACATAAACCCTTCTCTCGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTCTTCTATCTTTTTCTTTATTTGATACAAAGTGATGTGAGGAATCGAACCCAAGAACTTCGTCGCATTCCAAAAGCTGGATGGAAAACAAAACCATCATGA 843 0.4187 MKKVTTIVSIFLIALLCLQELVHVSSSPFLYARQVYEESSGGRKLEQEQGQEHDQELHCSRERSRAARKVIEEYLIPFVERENYRLSTKCRLHPENDIFSDQEEHKIFIDRHEWQCGYCKKSFREEKFLDQHFDNRHYNLLNVSHGKCLADLCGAMHCDAVTNFRSPRSKCNLAAAARNRHLCESLADNCFPISDGPAAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLIQSDVRNRTQELRRIPKAGWKTKPS 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium1624g00001 280 PANTHER ZINC FINGER PROTEIN-RELATED 7 279 - -
Vium1624g00001 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Vium1624g00001 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 137 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium1624g00001 Vium-Chr1624 29715 34116 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1624g00001 34 280 C2H2 Transcription Factor Family AT5G63280 60.324 2.26e-104 303