Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1593g00001 ATGCATACTCTCATTCGTGATGCTAAGGCAACAAAGCATGACTTTGCCTTCTACTCAGATCGTCTAATTAGATTGGTTGTCGAACATGGATTGGGTCACCTTCCTTTTTCTGAAAAGCAGGTGATAACTCCAACAGGATCTGTATATTCTGGTGTTGTTTTCTGTAGTAGGTTGTGTGGAGTTTCAGTAATTAGAAGTGGAGAAAGCATGGAAAATGCATTAAGAGCATGTTGTAAAGGAATCAAGATTGGTAAAATCCTTATTCATGGACATGGCACAAATGGTCGACAGTTAGTATATGAGAAGCTGCCAAAAGACATTGCAAGTCGTCATGTTTTGTTACTCGATCCGGTTCTGGCTACAGGAAACTCTGCAGTGAAAGCTATCTCTCTACTTCTGAAGAAAGGTGTACCAGAATCTAATATCATATTTCTAAACTTAGTAGCAGCACCACAAGGAATAAATGCAGTGTGTGAGAGATTTCCACTGATAAAACTTGTGACATCAGAGATTGATCAATCACTCAATGAGAATTCTCATGTCATCCCTGGCTTAGGGGAGTTTGCTGATCGTTACTTTGCCACTGATGATTAG 594 0.3973 MHTLIRDAKATKHDFAFYSDRLIRLVVEHGLGHLPFSEKQVITPTGSVYSGVVFCSRLCGVSVIRSGESMENALRACCKGIKIGKILIHGHGTNGRQLVYEKLPKDIASRHVLLLDPVLATGNSAVKAISLLLKKGVPESNIIFLNLVAAPQGINAVCERFPLIKLVTSEIDQSLNENSHVIPGLGEFADRYFATDD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1593g00001 197 Pfam Uracil phosphoribosyltransferase 1 195 - -
Vium1593g00001 197 CDD PRTases_typeI 58 168 IPR000836 -
Vium1593g00001 197 SUPERFAMILY PRTase-like 1 195 IPR029057 -
Vium1593g00001 197 Gene3D - 1 195 IPR029057 -
Vium1593g00001 197 FunFam Probable uracil phosphoribosyltransferase 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1593g00001 Vium-Chr1593 291 10823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1593g00001 1 197 PRT Gene Family AT3G27440 80.203 5.03e-118 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1593g00001 K00876 - vum:124827091 375.555