Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium158g00018 ATGGAAACTCAAACCTGCATCTTGGTTATTGCCTTCTCCCTAATCTTTCTATTGAATTGGTTTGCAAAACATTACAAGAATAAATCTCATGTCTCTCTCAAACTTCCCCCAGGCCCAAAGAGGCTACCCATCATAGGAAACCTTCATCAACTAGCAGTAGCAGGTTCACTTCCACACCGTGCTCTCCAAAATCTTTCCCATAAATATGGACCTCTCATGCACCTCCAACTTGGTGAGATTTCTGCAGTGGTTGCATCCTCCCCGGAGATGGCCAAGGAAATAACCAAAACACATGATGTCGCTTTTGTGCAAAGGCCTCAGTTTATTTCTGGGCAAATTTTGTCCTACGGGGGCATAGATGTTGTTTTCGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATTTGTCTCAGAACTTCTAAGTACCAAGAGAGTTCAGTCTTTCTCTTTTATTAGAGAAGACGAGACGGAAAAACTTATCGACTCGATTCGAACATCAGCAGGTTCACCAATCAATCTTACTGGCAGAATTTTCTCGTTGGTAAGCACTACTGTTTCCAGGGCAGCATTTGGTAACAAATCAAAGGACCAGGATGAATTTCTACTTTTGATTAAGAAAGTAATAGGATCGGTTGGAGGATTTGACCTTGCTGATTTGTTCCCTTCGATGAAATCCATACATTTCATAACTGGGAAGAAGGCCAAATTGGAGAAGCTGCTGAGTCAGGTTGACAGGGTCTTGGAAAATATTGTCAAAGAGCATCAAGAAAAGCAAAGAAGAGCGAAAGAAGGGAGAGCTCAAGTAAAGGAGGAAGATCTTGTTGATGTTCTTCTCGGAGTCCAACAAGCCGACGCTGCTCTCGATATCAAAATCACCACTAGGAACGTCAAAGCTTTGATATTGGACGTATTTGCGGGTGGCGTTGATACTTCTGCATCAACAATAGAGTGGGCAATGACAGAAATGATGCGAAGTCCAAGAGTGATGAAGAAAGCACAAGCTGAGTTAAGAGAAGCCTTAAGAGAGAAGGAAATGATCCATGAAAGGGATCTAGAGCAACTTAGTTATTTGAAGTTGGTGGTCAAAGAGACATTGAGGCTACACCCACCAACTCCATTGTTGATCCCTAGAGAATGCTCTGAACGAACCATCATCGATGGGTATGAAATACCTGTGAAAACTAAAGTGATGATAAACGTATGGGCAATTTGCAGGGATCCGAAATACTGGAATGATGCAGAGATGTTTGTCCCAGAAAGGTTTGAGGGAAGTAGTATCGATTTCAAAGGGAATAACTTCGAGTATCTGCCATTTGGCGCAGGAAGGAGAATATGCCCTGGCATCTCGTTTGGGTTAGCAGGTATCATGCTTCCACTGGCTCGATTACTTTATCATTTCAACTGGGAACTTCCAAATGGCATGACACCTGAGAGTATCGACACGGTTGAACGCTTTGGAATGGCCATTGGGAGGAAAAACCAATTGTGTTTGATTCCCATTGTTTATGATCCTTGA 1521 0.426 METQTCILVIAFSLIFLLNWFAKHYKNKSHVSLKLPPGPKRLPIIGNLHQLAVAGSLPHRALQNLSHKYGPLMHLQLGEISAVVASSPEMAKEITKTHDVAFVQRPQFISGQILSYGGIDVVFAPYGDYWRQMRKIFVSELLSTKRVQSFSFIREDETEKLIDSIRTSAGSPINLTGRIFSLVSTTVSRAAFGNKSKDQDEFLLLIKKVIGSVGGFDLADLFPSMKSIHFITGKKAKLEKLLSQVDRVLENIVKEHQEKQRRAKEGRAQVKEEDLVDVLLGVQQADAALDIKITTRNVKALILDVFAGGVDTSASTIEWAMTEMMRSPRVMKKAQAELREALREKEMIHERDLEQLSYLKLVVKETLRLHPPTPLLIPRECSERTIIDGYEIPVKTKVMINVWAICRDPKYWNDAEMFVPERFEGSSIDFKGNNFEYLPFGAGRRICPGISFGLAGIMLPLARLLYHFNWELPNGMTPESIDTVERFGMAIGRKNQLCLIPIVYDP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium158g00018 506 Coils Coil 235 273 - -
Vium158g00018 506 PANTHER OS08G0105600 PROTEIN 61 505 - -
Vium158g00018 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vium158g00018 506 Coils Coil 331 351 - -
Vium158g00018 506 CDD CYP71-like 68 497 - -
Vium158g00018 506 Gene3D Cytochrome P450 28 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 SUPERFAMILY Cytochrome P450 36 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 FunFam Cytochrome P450 71D8 28 501 - -
Vium158g00018 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium158g00018 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium158g00018 Vium-Chr158 162213 164706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium158g00018 14 501 Cytochrome P450 AT3G26310 43.750 1.53e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium158g00018 - K15472 gmx:100785715 819.305