Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1575g00033 ATGAGAGGTTTCAATGAAGAACATGGTGTTGTGGGGGGAAAGGAGGAAGAAAACTCGTGGCCTTCCTGGCTGCGGCCACTTCTCAAGACGAGTTTTTTTGTTCAATGCAAAGTCCACGCTGATTCCCACAAGAATGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGTTCTGCTTGTCTTGCTTCCCACAAAGAACACAGAACAATCCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGCGTCCAAACTTACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCCCAACCAAGGCCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGACCGCAGCCTTCTTGATTCCTTCAGCTTCTGTTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGACAGAAGGGTCTGATGGTGAAGAATCAGTGAACGGCATAAGCAATGTAAATGGCAGAAGCAAAATCCATAGCTTTACACCTTCAACACCACCACCAACAGTGGCTAATTACAGAACTGCAAAGAGAAGGAAAGGAATTCCACACAGAGCTCCAATGGGTGGAGGGCTGATTATAGAATACAACGTTGTATAG 678 0.441 MRGFNEEHGVVGGKEEENSWPSWLRPLLKTSFFVQCKVHADSHKNECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKFRKKKMLGETEGSDGEESVNGISNVNGRSKIHSFTPSTPPPTVANYRTAKRRKGIPHRAPMGGGLIIEYNVV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1575g00033 225 CDD Bbox2 36 75 - -
Vium1575g00033 225 Pfam PLATZ transcription factor 76 147 IPR006734 -
Vium1575g00033 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1575g00033 Vium-Chr1575 139392 141595 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium1575g00033 PLATZ 3.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1575g00033 - - gmx:100810757 417.542