Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1575g00027 | ATGATGCTTATTGTTCTTGTCTTTGGTTTTGTTGGGGACCATTATGTTCATCACTATGTTGTCCTCACCAACTACAACACAATTGAAAAATGCTGCGTAGGAATCTTTAACCTTAATCGAAGACTCGCATTGAAATGGCATCCTGACAAGCACGGAGGTGACAGTGCTGTTACTACAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTGCCAAGCGTCTTGATTATGATTTAACGGGGATATGCGAAATTGAAAAATATAGTTTACAGGAATATCTTGCCAGATTTAAGGGCATGATTCTTACCTGCAATGGACTTGGTATCAGTCAAACAGACAGATGGTCACCACAATTGATTGAAAATTTTGAATCCCTTGATAAATAA | 396 | 0.3687 | MMLIVLVFGFVGDHYVHHYVVLTNYNTIEKCCVGIFNLNRRLALKWHPDKHGGDSAVTTKFQEINEAYNVLSDPAKRLDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGISQTDRWSPQLIENFESLDK | 131 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1575g00027 | 131 | ProSiteProfiles | dnaJ domain profile. | 17 | 84 | IPR001623 | - | |
Vium1575g00027 | 131 | ProSitePatterns | Nt-dnaJ domain signature. | 61 | 80 | IPR018253 | - | |
Vium1575g00027 | 131 | CDD | DnaJ | 40 | 73 | IPR001623 | - | |
Vium1575g00027 | 131 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 40 | 115 | - | - | |
Vium1575g00027 | 131 | Pfam | DnaJ domain | 40 | 81 | IPR001623 | - | |
Vium1575g00027 | 131 | SMART | dnaj_3 | 30 | 76 | IPR001623 | - | |
Vium1575g00027 | 131 | Gene3D | DnaJ domain | 37 | 97 | IPR036869 | - | |
Vium1575g00027 | 131 | SUPERFAMILY | Chaperone J-domain | 40 | 104 | IPR036869 | - | |
Vium1575g00027 | 131 | PRINTS | DnaJ domain signature | 76 | 95 | IPR001623 | - | |
Vium1575g00027 | 131 | PRINTS | DnaJ domain signature | 39 | 54 | IPR001623 | - | |
Vium1575g00027 | 131 | PRINTS | DnaJ domain signature | 56 | 76 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1575g00027 | Vium-Chr1575 | 115039 | 117985 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1575g00027 | 40 | 81 | C2H2 Transcription Factor Family | AT1G74250 | 48.936 | 1.23e-06 | 44.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1575g00027 | - | - | gmx:100527491 | 183.341 |