Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium1575g00020 | ATGGTATCCCTCAAATCTGGAAACAAATTGGACAAATATTCTATGATTCTGAAAGCTGATATGAAACTCGAATCAGGGACTTGTAATGTTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTAATGGGGTCAAATGCCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGGTAAGTATTGTGAGGATGATGGGTCTTCTCCTGGTAGCAGAGCTTGCGAAAGATTGAAGCATGCTGGCGATGACACCAATCACAAGCCTAGTATTTCTTTAACTCATGATTCTCGGTCTGAAAATGCTGAGAATGGACAAGCCTTATCTGAGAAGAATCAGGATTCCAAGTGTTTTGAAAGTCTTGACGATATCACTTCTAGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGATAGGCACCAAATAAATACAGACAGAGTAAATGTATCTAGTAGTTCGACTTTAGTCAGTCACTTAGAGGCAGAAGGATCTGGACACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAATGCTTTATGGAAAATGTAGATTCGTCATTTACCAAAGGGAGAGTACCTATTATTGCTGCTGATGCAAAACCTGTGGCAGATAAGGAAAACCTAAATAATAGTACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGATGTTGCTAAAGATGAAGATCGTAAATATTTAGCCCATGATGGACTGCATGAGAAGGTTGATGAGCTGATTAAATCATCTGGCAGGTCTGAACCTCAATCAGAAGATGAGGGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTTGTAGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGAGGGAAATGCTTGTCAAGCTCCCGGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACAACAAATCGAAGGCTCGTTGTCAAAGAAAAGAAAAAGCTTCATAAAGTTATTTCAGCTTCACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCTAAAAGGCAAGCTCTTGAATCGAGCACAGGATCACCAAAGGCATCAAGCCCAAAGAGAATAGTCTCACTCTCACGAGAATCTTCTCTCAAGAGCATGGATAAAGGAAAAATGAAGTCTGGGCAACAGATCCCCATGCGTAACCACCTTGGTGGCAATGGTGGCAATAATGTAGACCTTGCTCGGTCTCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACATTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAAGCCTAGAATCAAACTTGTCAATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTCGAACATATTTCTAAGAATATTGAGACACCTGCGGGGATGATGAGCAAATCAGTGTCATTCAAATCCTCACACTTGGGGCGGTCAAATACTAATGATTCAAAAGTTAAATCAAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAACCACTGAGACATACAAAAGAATCGGGTTCACTTGACATGAAATTTCAACCTAAGATTGATCGACCTGTCATTTGTTCAACTACGGTTAGTTCTGTTGTTTCCACATCAAAAGGTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTACATTCATTATCGAAGTCTATGAATAATACAGGCAGTAGAAGCCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACCAGTGTTGATGAAACTCAACAGGATAGGATGCCTCGACTACACGAGACTGTTTATCAGGTTGACAGAACCAAAGATAGTTCTAATGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAGAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCTCGAGTAGTTGTAAGCAGGAATTTGGTCCTGAAGCATCAGTCATTACAAGTAGTTCAAAAAAGGATATTCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCGTAGAAGGCCTGAAATACATAAGAAGAAAGAAGGTCCTGATGAAACTAACGAGTTTCCTATATCAAGCAATGGTTTCAAACCTGAAGTCAATTCTCAAAGCCAAGTGTTGGTTTCCAACACAATGAAGAATAGTATATCTTCTGAAGAAACCCATGTGAAGCAGGAAATTCTTGAGAGTTCTTCATTTGAAACCTCTAAATATCCATCTGCTAATGATCCGAAGCAACTTAAATTTTGCCAAACTGATCCTTGCTCTCAGCTGAGAAAGTCAGATTTTGCTGGTCTCACTTCTGGAAAGCCTGTAGTGAGAGACTTGCCCAATAATGGCATGGCTATTTCAAGTGTTCTTTCGAAGATGTCGGTGATTCCGGAATATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCGTAGAAATGGAAAGCCTCCAGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCCAAAGTTATTGAGACAGTAAAGAATTTTTTACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGGTTAGAAATGATTTGGCACTTAGGGGGACGTTTGATGGTGTTGAACTTCTCATATTTGCATCCAATCAGCTTCCGGAAGATTCACAACGTTGGAATATGTTATTTTTTCTATGGGGTATATTTAGAGGGAGGAGGATCAATCATTCAGATTCCACAAAAAGTGCATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAGGATCCATCTGTCATCATGACTTTGTCTGAAACTTGGTGTTCACCAAAACGCATAGATGAAGAGTCCATTGATCAAGGTCACAATAAGCCATGTAGGAATTTTGATAGTAAGGGAACTGTGTTTGGCCAGACACATTTGGAATTGCAAGTAAAGTTAGAGAGACAAGATTCTAGAGTCAACACCAAATCTACATCAGGGATTCAGATCACCGGTACCCAATCATTTCAAGAAATGAATTCCTCTGGTTCGTCCCTGGGAGATAGTGCACCAGATCATAGACGGTACATACAGTCTAAACCTCCCGAAGCAATGGGAACTAGTGTAAGTAGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTTTGTCTTCGGAGATCCCTTCTGTCGTTTGCCAAATAGATACTGCAAGTAATATCATTAAGGATAAAACTTTAGAGAGAACAAAATATGATGAGAATCAGCAAAGGCCTAAAAGGAAACAGTTGGAGAATGATCTCAATATTAATGAGGAGGCAACGTTTCAGGGAGAGCTGGATTTGGAAGGGGCCAACTTTCAGGTACCTACTGATAAAAAAATTAAGAATATAGATCTTTCAGATACAGTTGTGGAAACTTCTACAGTTAGTTATCGGAAACGGCCTTTGAATGAGGTAAATGGCAAATTGGAAGACAGAGAAAGTAGCAAGAAGCTGCAAACAAGTTTGGGTGGAGCTTTTGGATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTCAGTGGTAGTTTCCCATCACTTGTGAACAATCTTGGTTCCTGTTCTTTAGGGGGCAAAGAAGCTTGCGATGAGAAAATCATCCACGAGGACCTAGGAACGATGGAAAGAACCTTTTTTCCTGTGGATACTCGTAATAAACTTAACTTGGGGATGGTGAACAGAGAGTCACTGAATGGGCCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGAGGTGAAACGAAACCGTCACACAAGGGTATGATGCCTTTCTTTGTTGGTACAGGTGACAAGAAAATCAACCCAGAAAAGACTCCAGATATCGAGCGAGACGATGACAACGTTGCTGCATCTCTTTCCTTGTCACTATCATTTCCATCATCAAGCAAAGAACACATCAAACCAGTTGCAAGAGATGAGCCTTTGCCTGATGCTAAATCACCGTTTCTTCTTTTTGGTAGATTCACGGACAAATAA | 4266 | 0.4072 | MVSLKSGNKLDKYSMILKADMKLESGTCNVCSAPCSSCMHLNRALMGSNAKEFSDENSRLGEGKYCEDDGSSPGSRACERLKHAGDDTNHKPSISLTHDSRSENAENGQALSEKNQDSKCFESLDDITSSISRTSNANLASDRHQINTDRVNVSSSSTLVSHLEAEGSGHGPSVDMSGLSECFMENVDSSFTKGRVPIIAADAKPVADKENLNNSTAKVSVEICPKSEADMGNNVDVAKDEDRKYLAHDGLHEKVDELIKSSGRSEPQSEDEGDESDVVEHDVKVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETTNRRLVVKEKKKLHKVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQIPMRNHLGGNGGNNVDLARSLSTGPRSQNPRSTLLKSNSFNNFNSKPRIKLVNEVVPQKQKGGVEHISKNIETPAGMMSKSVSFKSSHLGRSNTNDSKVKSSFSKPGIVQDLKPLRHTKESGSLDMKFQPKIDRPVICSTTVSSVVSTSKGDHKLAPHGETAKPYTVNNNREFKVNQDGKVHSLSKSMNNTGSRSPEPQVSSDRTSTSVDETQQDRMPRLHETVYQVDRTKDSSNDHVRSGVTNASKSSFCRKCKDFGHATECCSSSCKQEFGPEASVITSSSKKDIHKGNRLKAAIQAALRRRPEIHKKKEGPDETNEFPISSNGFKPEVNSQSQVLVSNTMKNSISSEETHVKQEILESSSFETSKYPSANDPKQLKFCQTDPCSQLRKSDFAGLTSGKPVVRDLPNNGMAISSVLSKMSVIPEYEYIWQGVFEVRRNGKPPDLYAGIQAHLSACASPKVIETVKNFLPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDIESYERHYKGLLDHMVRNDLALRGTFDGVELLIFASNQLPEDSQRWNMLFFLWGIFRGRRINHSDSTKSACIPSLNVMPNEKDPSVIMTLSETWCSPKRIDEESIDQGHNKPCRNFDSKGTVFGQTHLELQVKLERQDSRVNTKSTSGIQITGTQSFQEMNSSGSSLGDSAPDHRRYIQSKPPEAMGTSVSRRIVETKTNPDISGKQETSLSSEIPSVVCQIDTASNIIKDKTLERTKYDENQQRPKRKQLENDLNINEEATFQGELDLEGANFQVPTDKKIKNIDLSDTVVETSTVSYRKRPLNEVNGKLEDRESSKKLQTSLGGAFGCNDSAGARVSFSGSFPSLVNNLGSCSLGGKEACDEKIIHEDLGTMERTFFPVDTRNKLNLGMVNRESLNGPREYVDQFEVGIPNLELALGGETKPSHKGMMPFFVGTGDKKINPEKTPDIERDDDNVAASLSLSLSFPSSSKEHIKPVARDEPLPDAKSPFLLFGRFTDK | 1421 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 431 | 457 | - | - | |
Vium1575g00020 | 1421 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 212 | 346 | IPR013083 | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 65 | 118 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 721 | 747 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 563 | 586 | - | - | |
Vium1575g00020 | 1421 | PANTHER | - | 283 | 1013 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 355 | 457 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 358 | 402 | - | - | |
Vium1575g00020 | 1421 | SUPERFAMILY | FYVE/PHD zinc finger | 273 | 337 | IPR011011 | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 73 | 97 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 599 | 631 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 1080 | 1115 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 599 | 629 | - | - | |
Vium1575g00020 | 1421 | MobiDBLite | consensus disorder prediction | 98 | 118 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium1575g00020 | Vium-Chr1575 | 91302 | 100831 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium1575g00020 | 178 | 370 | C2H2 Transcription Factor Family | AT3G01460 | 24.352 | 3.18e-08 | 56.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium1575g00020 | - | - | vun:114169861 | 2501.86 |