Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1566g00006 ATGATGGAAAACCACCAGCACCCTTCGTCAAACGACGTCGTTGTCAACGTCAATGGCGACTCTGACTCTGACGCTCGCCGCCTTCACCCAACTGACCATGCAGTTTCCTCTCAGCTGCAACAACAACGACGGGTGCAGGAAGGGAACGAAAGAAGGAAGAGTTTGGTTCTTGCGTACAAGACTCTTGGGGTGGTGTTTGGAGGACTTGTGACGTCACCCCTCTACGTGTACCCTTCAATGCCTCTCAAGTCTCCAACGGAAGATGATTATTTGGGCATTTACAGCATTATGTTTTGGACTCTTACTCTCATAGGGGTTGTCAAGTATGCCAATGTAGCCATTAGAGCTGATGACCACGGTGAAGGTGGGACTTTTGCCTTGTATTCATTGCTTTGCAGGCATGTCAATATTGGGATCCTGCCTCCCAAGCATGTGGGTTTGAACACAACTAAGGATGTTCAGAAGAGAACTTTGCTTGCCAAGTTCTTCCAAACAAGCTTAGTTGCTCGGAGGCTCTTGCTCTTTGTTGCTATGTTGGGTACTTGCATGCTTATTGGTGATGGTATACTTACGCCAGCAATTTCAGTGTTATCAGCAATGGATGGACTTAGAGCACCTTTTCCTTCAGTTAGCAAATCGCTAGTGGAAGCACTCTCTGCAGTAGTTCTCATTGTTCTGTTTCTGTTGCAAAAGTTTGGTACATCCCGTGTTAGTTTCCTATTTTCCCCAATAATGGGCGCATGGACCCTGAGTACCCCACTTGTAGGAGTTTACAGCATCATACACCACTATCCTAGCATATTTAAGGCTTTATCTCCCCACTATATATTCCACTTCTTTTGGAGAAATGGAAAATCTGGATGGCTTTTACTTGGTGGTACTGTACTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTCAATCCGAAGTCCATTCAGATAGCTTTTCTGTTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAGACAGCTTACCTGATCAAGCATCCCAATGATCATGATGATGGCTTCTACAAATTTATACCAACTTCAGTCTACTGGCCCATCTTTGTCATTGCCACTTCTGCTGCAGTTGTTGCTAGCCAATCATTAATATCAGCCACCTTTTCTGTAATCAAGCAATCAGTAGTCCTGGATTATTTTCCTAGAGTAAAGGTTGTCCACACATCTAAAAGTAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTGATGGTCCTTTGCGTAGCTGTGATTCTTATTTTTGGAGATGGAAAAGATATAGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTTATGCTTATCACCACTATATTGCTTACACTAGTCATGATCATGATATGGAGGACTCCTGCTGTGCTAGTTTGCCTTTACTTCGTCGTATTTTTTGTGATGGAAGGGATTTATGTTAGTGCAGTTTTCACCAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCATTCATCCTTGCTTTCATCATGTTTGGTTGGTTTTATGGTAGACAAAAAAAGACTGATTACGAATTAACCCACAAGATAACCTTTGAGAGACTTGAAGAGCTTTTAGCTGACCGCAGTGTTAATAGGGTTCCTGGGCTATGCTTCTTTTATACCAACATTCAAGACGGGTTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCATAAGGTCACAGTATTCACTACTCTTAGATATTTGTTAGTTCCAAAGGTTGCTCCACAAGATAGGATTGTAATCAAGAAATCAAATCTCAAAGGGGTGTATTGCTGTATGATTCAGTATGGCTATGCAGATGCTCTAAATTTGGAAGGAGATCATTTTGTTGACCAAGTCATTAGTAGTTTGGCAAAACATATACAGAAGCATCAGTCTCCAGAGAATCTTTCTGATTCTGAAGAGACTGAAGAAGAGGCTTCGAACTTAGAAGAAGCAAGGGTTGCTGGGGTAGTTCATGTTCGTGGAAAGACCAGATTTTACATTGGCCAAAACTGTAGCTGGTTTGATAAATTTGTGCTTAGTTTTTATGAAGTTATGCACAATAACTGTAGATCTGGTTTGCCTGCTCTTGGGATTCCACCGCAGCAACGGATTGAAGTTGGAATGCTATACGAAGCTTGA 2178 0.421 MMENHQHPSSNDVVVNVNGDSDSDARRLHPTDHAVSSQLQQQRRVQEGNERRKSLVLAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYANVAIRADDHGEGGTFALYSLLCRHVNIGILPPKHVGLNTTKDVQKRTLLAKFFQTSLVARRLLLFVAMLGTCMLIGDGILTPAISVLSAMDGLRAPFPSVSKSLVEALSAVVLIVLFLLQKFGTSRVSFLFSPIMGAWTLSTPLVGVYSIIHHYPSIFKALSPHYIFHFFWRNGKSGWLLLGGTVLCITGSEAMFADLGHFNPKSIQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPTSVYWPIFVIATSAAVVASQSLISATFSVIKQSVVLDYFPRVKVVHTSKSKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAVLVCLYFVVFFVMEGIYVSAVFTKFAEGGWIPFAISFILAFIMFGWFYGRQKKTDYELTHKITFERLEELLADRSVNRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTVFTTLRYLLVPKVAPQDRIVIKKSNLKGVYCCMIQYGYADALNLEGDHFVDQVISSLAKHIQKHQSPENLSDSEETEEEASNLEEARVAGVVHVRGKTRFYIGQNCSWFDKFVLSFYEVMHNNCRSGLPALGIPPQQRIEVGMLYEA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1566g00006 725 MobiDBLite consensus disorder prediction 1 18 - -
Vium1566g00006 725 NCBIfam potassium uptake protein 57 724 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1566g00006 725 MobiDBLite consensus disorder prediction 1 47 - -
Vium1566g00006 725 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 44 724 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1566g00006 725 Pfam K+ potassium transporter 59 618 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1566g00006 Vium-Chr1566 193509 198104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1566g00006 2 724 Inorganic Solute Cotransporters AT4G13420 37.262 1.22e-180 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1566g00006 K03549 - gmx:100783944 1272.69