Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1558g00002 ATGGCAACCACAGCTTCCTTACATCGCCTTTCTCGTCTCCGATTCATAGCCAATTCCCAACCCCTTCTATCACCTTTTTCAATTCCATCGTATTTCTCTCTCACCCCCAAAACCAAGAAATTGAATCGATTGCGATTCTTGTCAATGGCTTCGGGACCCAAGGAATCGCCCGCCAACAACCCCGGTCTGCATACAACTCCGGACGAAGCTACCAAGGGTTACATTATGCAGCAAACTATGTTTCGAATCAAGGACCCCGAAGTGAGCCTTGATTTCTATTCTCGCGTCTTGGGCATGTCTTTGCTTAAGAGGCTGGATTTTGTGGACATGAAGTTCAGCCTGTATTTTTTGGGCTATGAGGATACGTCAAAAGCTCCGAGTAATCCAGTTGATAAAACAGTTTGGACCTTTTCCCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGATACCACAATGGAAATTCTGAACCTCGCGGCTTTGGACACATTGGCATAACTGTTGATGACACAGTAAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGATGAAGGGAAAATGAGAGGTATAGCATTCATCAAGGACCCTGATGGATACTGGATTGAAATCTTTGATCTAAAAAAAATAGGAAGTGTTACTCAAAGTGCATCTTAG 702 0.433 MATTASLHRLSRLRFIANSQPLLSPFSIPSYFSLTPKTKKLNRLRFLSMASGPKESPANNPGLHTTPDEATKGYIMQQTMFRIKDPEVSLDFYSRVLGMSLLKRLDFVDMKFSLYFLGYEDTSKAPSNPVDKTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTVKACERFQNLGVEFVKKPDEGKMRGIAFIKDPDGYWIEIFDLKKIGSVTQSAS 233
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium1558g00002 233 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Vium1558g00002 233 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 222 IPR037523 -
Vium1558g00002 233 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 219 IPR004360 -
Vium1558g00002 233 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 65 221 IPR029068 -
Vium1558g00002 233 Gene3D - 52 228 IPR029068 -
Vium1558g00002 233 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 35 227 - -
Vium1558g00002 233 CDD GlxI_Zn 76 220 - -
Vium1558g00002 233 ProSitePatterns Glyoxalase I signature 2. 163 179 IPR018146 GO:0004462|GO:0046872
Vium1558g00002 233 NCBIfam lactoylglutathione lyase 76 224 IPR004361 GO:0004462|GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium1558g00002 Vium-Chr1558 2928 8152 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1558g00002 13 233 Calmodulin-binding Proteins AT1G08110 72.072 1.24e-111 318