Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1558g00001 ATGGCTTCGGGACCCAAGGAATCGCCCGCCAACAACCCCGGTCTGCATACAACTCCGGACGAAGCTACCAAGGGTTACATTATGCAGCAAACTATGTTTCGAATCAAGGACCCCGAAGTGAGCCTTGATTTCTATTCTCGCGTCTTGGGCATGTCTTTGCTTAAGAGGCTGGATTTTGTGGACATGAAGTTCAGCCTGTATTTTTTGGGCTATGAGGATACGTCAAAAGCTCCGAGTAATCCAGTTGATAAAACAGTTTGGACCTTTTCCCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGATACCACAATGGAAATTCTGAACCTCGCGGCTTTGGACACATTGGCATAACTGTTGATGACACAGTAAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACCAGATGAAGGGAAAATGAGAGGTATAGCATTCATCAAGGACCCTGATGGATACTGGATTGAAATCTTTGATCTAAAAAAAATAGGAAGTGTTACTCAAAGTGCATCTTAG 558 0.4319 MASGPKESPANNPGLHTTPDEATKGYIMQQTMFRIKDPEVSLDFYSRVLGMSLLKRLDFVDMKFSLYFLGYEDTSKAPSNPVDKTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTVKACERFQNLGVEFVKKPDEGKMRGIAFIKDPDGYWIEIFDLKKIGSVTQSAS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1558g00001 185 MobiDBLite consensus disorder prediction 1 21 - -
Vium1558g00001 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Vium1558g00001 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 5 179 - -
Vium1558g00001 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 30 171 IPR004360 -
Vium1558g00001 185 Gene3D - 6 180 IPR029068 -
Vium1558g00001 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462|GO:0046872
Vium1558g00001 185 CDD GlxI_Zn 28 172 - -
Vium1558g00001 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 17 173 IPR029068 -
Vium1558g00001 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462|GO:0046872
Vium1558g00001 185 NCBIfam lactoylglutathione lyase 28 176 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1558g00001 Vium-Chr1558 2928 8235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1558g00001 1 185 Calmodulin-binding Proteins AT1G08110 81.081 1.80e-108 308