Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1551g00001 ATGAAAGTTGTTAAGGAATGGTTGAAGGGGTCGAAGACTGTGCTTAGCATGTTTTTAGTGCAAGTTTTTGCAACAGGGATGCAGATTCTATCGAGGGTTATACTTGTTGAAGGCACTTTCATTTTCGCACTCATTGCCTACCGTCACGTTATTGCTGCTGTTTGTGTTGCCCCTTTTGCTTTCTACTTTGAAAGAGGCCGCCAAAAGAAGTTGAGGTGGTCGATTTGGTTCTGGCTCTTCCTTAACGCCTTAGTGGGGATAACACTGGCTATGGGACTGTTCTATTATGGTCTGCGAGATACATCAGCTACTTACTCTGTCAATTTTCTGAGCTTGGTTCCTATCTCCACTTTCATTTTCTCTATTATATGCAGAATGGAGAGGGTGGAGATTGGAAGATGGACGAGTAAAGTGAAGACAATAGGAGCAACTTTGTGTGTCGGGGGAGCATTAACGACTAGTCTGTACAAAGGGAAGGAATTCTATATTGGTCTAACTACCCATCATTCACACACTACATCAGTTCAGTCATCCAAAGTCAACATGCTTCGTGGCACTCTTTTTTTGCTTGGTAGCTGCTTCTCATACACAGCTTGGTTCATCGTTCAAGTGAAGTTGCTTGAAATATTTCCATTCAAATATTGGGGAACGATGCTTACGTGCATTATAGCATCAATTCAAGCAGCAATAGTCGGAATATGCTTAGATTGCAGAAAAATTACTTGGACTTTAGAGTGGAATCTACAACTTATCACAATAATATACTCGGGAACATTGGCCACAGCTGCTACGTTTTGCTTAATTTATTGGGCAATTTCAATCAAAGGACCGACTTATCCCACAATGTTCAATCCATTGGCTCTTATTTTTGTGACCATATCAGAAGCTATCTTACTTGGTGAACCGATCAGTCTTGGCATGTATGAGTGA 930 0.4118 MKVVKEWLKGSKTVLSMFLVQVFATGMQILSRVILVEGTFIFALIAYRHVIAAVCVAPFAFYFERGRQKKLRWSIWFWLFLNALVGITLAMGLFYYGLRDTSATYSVNFLSLVPISTFIFSIICRMERVEIGRWTSKVKTIGATLCVGGALTTSLYKGKEFYIGLTTHHSHTTSVQSSKVNMLRGTLFLLGSCFSYTAWFIVQVKLLEIFPFKYWGTMLTCIIASIQAAIVGICLDCRKITWTLEWNLQLITIIYSGTLATAATFCLIYWAISIKGPTYPTMFNPLALIFVTISEAILLGEPISLGMYE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1551g00001 309 PANTHER WAT1-RELATED PROTEIN 13 305 IPR030184 GO:0016020|GO:0022857
Vium1551g00001 309 Pfam EamA-like transporter family 184 305 IPR000620 GO:0016020
Vium1551g00001 309 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Vium1551g00001 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1551g00001 Vium-Chr1551 20218 29542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1551g00001 15 308 Nodulin-like Gene Family AT1G09380 33.444 1.72e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1551g00001 - - vun:114164630 578.941