Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15420g00008 ATGGATTCCAGCAGCGAAGTAGCCCTCGATTTAACACCCTTTCTAAAAATCTACAAAGACGGTCGCGCCGAGAGAATTTCAGGCTGCGACGTCGTTCCGCCGGGCATCGATTCCGCAACAAATGTCCTATCCAATGACTTCGTAATCTCAAAAGACGACGACGTATCAGCCAGGATCTTCACTCCCAAACTAAGCGATCAAAGCCAAAAGCTCCCCCTCCTTGTCTACTTCCACGGTGGGGGGTTCTGCATAGAAACACCATACTCTCCACCTTACCATAAATTCCTCAACTCACTTGTTTCCAAGGCCCACATCGTTGCCGTCTCCGTTCACTACAGAAGAGCCCCTGAACACCCCGTTCCCATCGCTCACCAAGATTCCTGGTCTTCGCTCCAATGGGTGGCCTCCCATTGTAACGGAAACGGCCCTGTGGAGTGCCTCAATCGCCACGCTGATTTCGGGAATGTGTTCTTCGCTGGGGACAGTGCGGGAGCAAACATCGCACACCACATGGCTCTACGCGTCGGAATCCACGGCCTTCCGGGTATCAACCTCCAAGGGATTGTGCTGGTTCATCCTTACTTTTGGGGCGTGGAGCGAATCGGTTCTGAGGTCCAAAAGCTCGACCAAGTTCCCATGGTGGATAATTTGTGGAGTTTCACTTGCCCTGCCTCGACAGGATCCGACGACCCGTTGTTGAACCCGGCTAAGGATCCGAATCTGGGGAAGCTGGCCTCGAAAAGAGTGCTGATTTGTGTTGCTGAGACTGATTTGCTGAAGGATAGGGGTTGGTATTACAAGGAGTTGCTGGAGAAGATTGAGTGGCAAGGTGTTGCTGAGGTGATGGAGGCAAAAGGAGAAGGTCACGTCTTTCATTTGTTCGATCCAGATTGTGACAGCGCTGTCTCCTTGCTCCAACGAATTGCTTCCTTCATTAACAACAGTTAA 948 0.5158 MDSSSEVALDLTPFLKIYKDGRAERISGCDVVPPGIDSATNVLSNDFVISKDDDVSARIFTPKLSDQSQKLPLLVYFHGGGFCIETPYSPPYHKFLNSLVSKAHIVAVSVHYRRAPEHPVPIAHQDSWSSLQWVASHCNGNGPVECLNRHADFGNVFFAGDSAGANIAHHMALRVGIHGLPGINLQGIVLVHPYFWGVERIGSEVQKLDQVPMVDNLWSFTCPASTGSDDPLLNPAKDPNLGKLASKRVLICVAETDLLKDRGWYYKELLEKIEWQGVAEVMEAKGEGHVFHLFDPDCDSAVSLLQRIASFINNS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15420g00008 315 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 156 168 IPR033140 -
Vium15420g00008 315 PANTHER ARYLACETAMIDE DEACETYLASE 12 296 - -
Vium15420g00008 315 Pfam alpha/beta hydrolase fold 74 292 IPR013094 GO:0016787
Vium15420g00008 315 SUPERFAMILY alpha/beta-Hydrolases 39 314 IPR029058 -
Vium15420g00008 315 Gene3D alpha/beta hydrolase 23 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15420g00008 Vium-Chr15420 69063 70285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15420g00008 5 313 Carbohydrate Esterase AT3G48700 47.222 6.76e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15420g00008 - - gmx:100801816 504.597