Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15420g00007 ATGGATTCCAGTTCTACCGAAGTAGCCTTCGATTTCTCACCCTTTCTCAAAATCTACAAAGACGGTAGCGTCCAGAGACTTGCCGGCTGCGACGTCACCCCGCCGGGTTTCGATACCGAAACAAACGTGGAATCCAAAGACATCGTAATCTCGAAAGACGACGACGTATCGGCCAGGATATTTATTCCCAACGTCAGCGATCAAACCCAAAAGCTTCCTCTCCTAGCCTACTTCCATGGTGGGGGATTCTGCATAGAAACACCATACTCTCCTCCTTACCATAAATTCCTCAACTCACTTGTTTCCAAGGCCCACATCTTTGCTGTGTCTGTTCATTACAGAAGAGCACCAGAGCACCCCCTTCCCATTGCCTATGAAGATTCATGGACCTCGCTCAAGTGGGTGGCGTCCCATTTCGACGGAAACGGCCCTGAGGAGTGCCTCAATCGCCACGTTGATTTCGGGAAGGTTTTCTACGGTGGGGACAGTGCGGGAGCAAACATCGCACACAATATGTGTATTCGAGCGGGGATCCACGGGCTTCCGGGTGTTAACGTTGAGGGGATTGTTTTGGTGCATCCCTACTTTTGGGGCGTGGAGCGAATCGGAAGTGAGAGCCAAAAGCCTGAACATCTTGCAGCGGTGGATAATTTGTGGCGTTTTATTTGTCCCACCTCGACAGGATCCGACGACCCGTTGATCAACCCGGCTACGGATCCGAATCTGGCAAAGCTAGCTTGCAGGAGAGTGATGATCTTTGTTGCTGAGAATGATTTGATGAGGGATCGGGGTTGGTATTACAAGGAGTCGGTAGAGAAGTGTGGGTGGCAGGGTGTTGCAGAGGTCATGGAGGCGAAAGGAGAAAACCACGTGTTTCATTTGTTCAATCCAGATTCTGACAACGCTGTCTCCCTGCTCAGTCGATTTGTTTCTTTTATCAACCATAGTAGTTAA 954 0.501 MDSSSTEVAFDFSPFLKIYKDGSVQRLAGCDVTPPGFDTETNVESKDIVISKDDDVSARIFIPNVSDQTQKLPLLAYFHGGGFCIETPYSPPYHKFLNSLVSKAHIFAVSVHYRRAPEHPLPIAYEDSWTSLKWVASHFDGNGPEECLNRHVDFGKVFYGGDSAGANIAHNMCIRAGIHGLPGVNVEGIVLVHPYFWGVERIGSESQKPEHLAAVDNLWRFICPTSTGSDDPLINPATDPNLAKLACRRVMIFVAENDLMRDRGWYYKESVEKCGWQGVAEVMEAKGENHVFHLFNPDSDNAVSLLSRFVSFINHSS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15420g00007 317 Gene3D alpha/beta hydrolase 19 316 IPR029058 -
Vium15420g00007 317 Pfam alpha/beta hydrolase fold 76 293 IPR013094 GO:0016787
Vium15420g00007 317 SUPERFAMILY alpha/beta-Hydrolases 33 314 IPR029058 -
Vium15420g00007 317 PANTHER ARYLACETAMIDE DEACETYLASE 12 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15420g00007 Vium-Chr15420 50898 51918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15420g00007 6 314 Carbohydrate Esterase AT3G48690 47.335 2.89e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15420g00007 - - gmx:100801816 528.865