Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15420g00006 ATGGAACCAAGCATCAAGCCCGGCGAGGTTGTCCGCGAGTTTCCTCACCTCTTCCGCGCCTACAAAGACGGCAGCGTCGAGCGTCTCCTCGGCACCGAAACCACTCCTGCCGGAACAGACCCCACCACCGCCGTTGAATCCAAAGACGTCACCATAAACCCCCAAACCAACGTCGCCGTCCGCCTCTACCTCCCTTCCAACGCTTCCTCCTCCTCCGAGAAACTCCCTATTCTCGTCTACATCCACGGCGGCGCCTTCTGCGTCTGCACCCCCTTCAACCCCGCCTACCACAACCACCTTAACACAGTCTGCGCGGGCGCCAGCGTTATCGTGGCCTCCGTTCACTACCGCCTCGCCCCGGAGCACCCGCTTCCCGCCGGCTACAACGACACCTGGGAGGCCTTCCTGTGGGTCGCCTCCCACGCTGCCGGTTCCGGCCCGGAGCCCTGGCTCAACGCCCACGGCGATCCAAAAAACGTGTTCATAGCCGGTGACAGCGCCGGCGGTAACATCGCGCACAACGTGGCGATGCGAGGCAGTGCTGAGGGGTTCTCGGGATTGAACCTCCAGGGGATGGTGCTGCTCCACCCATTCTTCGGGAACGATAAAAAGGATGAGCTGGTAGAGTATCTGTACCCTACCTACGAAGGACCGAGCAACATGATGATCCACGCCCCGCTGGATCCGAAACTATCGGATCTGGCGTGTCCGAGGTTGCTGATCTTCGTGTCAGAGAAAGATTTTCTGAGGGACAGAGGGATAAGCTATTACGAGGCGCTGAAGAAAAGCGGGTGGAAGGGTGAGGTGGAGAAGGTGGAGTTCCCCGGAGAAGACCACGTGTTTCATCTTCTTCAGCCCTCTAAGCAAAATTCCTTGGATCTCGTTAAACAGTTTGTCGCATTCTTGAAGCAAACCCCCTCGAGCCGCTGA 930 0.5892 MEPSIKPGEVVREFPHLFRAYKDGSVERLLGTETTPAGTDPTTAVESKDVTINPQTNVAVRLYLPSNASSSSEKLPILVYIHGGAFCVCTPFNPAYHNHLNTVCAGASVIVASVHYRLAPEHPLPAGYNDTWEAFLWVASHAAGSGPEPWLNAHGDPKNVFIAGDSAGGNIAHNVAMRGSAEGFSGLNLQGMVLLHPFFGNDKKDELVEYLYPTYEGPSNMMIHAPLDPKLSDLACPRLLIFVSEKDFLRDRGISYYEALKKSGWKGEVEKVEFPGEDHVFHLLQPSKQNSLDLVKQFVAFLKQTPSSR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15420g00006 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 160 172 IPR033140 -
Vium15420g00006 309 PANTHER ARYLACETAMIDE DEACETYLASE 13 287 - -
Vium15420g00006 309 Pfam alpha/beta hydrolase fold 78 282 IPR013094 GO:0016787
Vium15420g00006 309 SUPERFAMILY alpha/beta-Hydrolases 20 304 IPR029058 -
Vium15420g00006 309 Gene3D alpha/beta hydrolase 17 307 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15420g00006 Vium-Chr15420 44556 45988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15420g00006 9 302 Carbohydrate Esterase AT1G49660 42.357 8.04e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15420g00006 - - gmx:100799964 445.662