Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15411g00024 ATGACATCGTCGGAAATGTCTGCCATAGCTTCCTCCCTGCTTCTCCCACTTGGTTCTACTTGTGGTAAAAGTCCCTCCTTTACTCCTCCTCAGAGCATTTTGGTTGACAAATTTCGAAGATTAGTTGTTAAAGTCGAATCCTCAGAGACAAGGGAATGCACTACTGCTATGTTTAATGCCAATTCACGTCGAAACTTTCTTGGGTTGGCTCTTGGAGTCTCAGGCCTCTTCATCGGTTCATTGGATGCCAGTGGAGCTGGTTTGCCCCCAGAGGAAAAGCCAAAACTGTGTGATGAAACTTGTGAGAAAGAGCTTGAAAATGTGCCTATGGTAACTACGGGATCTGGTTTGCAATACAAGGATATTAAAGTAGGGCAGGGTCCTAGTCCACCAATTGGATTTCAGGTGGCCGCTAATTATGTTGCAATGGTTCCATCGGGACAAATATTTGACAGTTCACTGGAGAAAGGACAGCTTTACATTTTCCGCGTTGGTTCTGGTCAGGTTATACCGGGACTTGATGAAGGTATTCTGAGCATGAAAGTGGGAGGGAAGCGCCGACTGTACATACCTGGATCATTGGCATTTCCAAAAGGCCTTACTTCTGCTCCTGGAAGACCGAGGGTGGCTCCAAGCAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCGGGGCTTGAAGTGGACGAGGAATAA 699 0.4592 MTSSEMSAIASSLLLPLGSTCGKSPSFTPPQSILVDKFRRLVVKVESSETRECTTAMFNANSRRNFLGLALGVSGLFIGSLDASGAGLPPEEKPKLCDETCEKELENVPMVTTGSGLQYKDIKVGQGPSPPIGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIPGLDEGILSMKVGGKRRLYIPGSLAFPKGLTSAPGRPRVAPSSPVIFDVSLEYIPGLEVDEE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15411g00024 232 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 87 225 - -
Vium15411g00024 232 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 221 IPR001179 GO:0003755
Vium15411g00024 232 SUPERFAMILY FKBP-like 98 221 - -
Vium15411g00024 232 Gene3D - 91 222 IPR046357 GO:0003755
Vium15411g00024 232 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 133 225 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15411g00024 Vium-Chr15411 109202 112345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15411g00024 115 221 Calmodulin-binding Proteins AT3G25230 36.111 1.79e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15411g00024 K01802 - gmx:100818743 427.943