Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15409g00003 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTATACTCACTCGAACCCAACAAAGTGGAACAAGCAGCGTTTGCTAGAAACTACATGAACTATTTGGTGCCGGCATTGATCAAGATCAAGGAAAGAAATACCTCTTCAGAACACTGTGATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCAGCCCAGGGTTTTGCATGGAGCGATGCTCTGAGTGTGAAGCTTCAGAGGAATAGAGCCAATGCAGATAGTGACAGAAGCAGCTTCCGTGACAAGGACAAGGCTGGTGAAGGCTCATCAAGGATTTGTGGCCAAAATGGTGAAATGGTGCCATTGAACAACCGTTTCACTTCAAACCCTAGTTTGAAGCTTAGAAATAAACACAGGAGCATGCCTGAAATGAAAAGGGGTTTGAGAGAAGAAGATGAAGATCAGTTGAAGAGCCTTAGAATGTTGATACCTGGGGGAGAAGAGATGTGTAGTGAACAAATGGTGACTGAGCTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTCAACATTCTTCAGTGCCTCGCAGAGACACATTGA 585 0.4462 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALIKIKERNTSSEHCDIQNVVKYEVDMAMVHSAQGFAWSDALSVKLQRNRANADSDRSSFRDKDKAGEGSSRICGQNGEMVPLNNRFTSNPSLKLRNKHRSMPEMKRGLREEDEDQLKSLRMLIPGGEEMCSEQMVTELQSYVSCLQMQVNILQCLAETH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15409g00003 194 MobiDBLite consensus disorder prediction 111 127 - -
Vium15409g00003 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 192 IPR044660 GO:0006355
Vium15409g00003 194 MobiDBLite consensus disorder prediction 83 127 - -
Vium15409g00003 194 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15409g00003 Vium-Chr15409 68743 69920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15409g00003 7 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.000 1.27e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15409g00003 - - gmx:100527269 276.944