Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1538g00003 ATGGCGGCACCCAACAGCAACAACAACGCGACGCCGAAGCCCGGAACCCTAGCCGTTGGTGTAATCCCTACTCCGCCTAAGTCTCAACGCGGCCACAACAAGCCCAAGTGCAAACAGTGTGGCAATGTCGCTCGTTCAAGGTGTCCCTATGAATGTTGCAAGAGATGCTGTTCTAGAAATCAAAATCCTTGCCACATCCATGTGTTAAAAGCTAATTCGACTTTTCCCGACAAGTCACCCTCATCTGGTAGCTCTCCACATGATCACCAACCCTTAGAACCTCCTCAATCAACAAGTGCAGGAAGAGTTGCATCACTTAGACAACTTTCAAATAGTTTTGCTCAGTTCAATAATTTACACCTTTCACTTCGTTCGAAGAAGCCATTGACTAGAAAGGATGCTGTAGCTATCAACGAATGGAGATTTGCCAAGTTAAAAGAATACAAGGAACGGAATATTGAAGTGGAAAATGAAGCTTTTGACCGATACATGCAGAATGTAGATTTACTGGAAGAAGTATTAGCAGTGAAGTCGTTGGATGACGATGTATCGTCTGCATTGGATGCTAATCCTAGTCCAACGGAGAGCAATGAGACAATGATCCCAGGGCTAAAATTGCAGCTAAGATCAAACTCTATGAGAAGTGATGGTTTGAGAACGAGAATACAACAAATCGTAGATGAGGGATTAAAGAAGCTTGAGAGAAGTGCTGTAGATGGTGACATGGATGAATCAATTGATGAAGAAGGCAATAAAGCTTCAAAAAGGGGAAAGGGGATGGAAAGGTTATCAGCTATAAGTGATCTTATGGATAAGATCAATAAAGCCCGAAGTGAGGAGGATTTGAAGTCGTGCTTAGAGATGAAGTCCCAACTCTTCAATTTGGACGAAGGATCTTGCGTGATAGATGATCTTAAAGACAATGAAATTATTGAGAATCAAACTGCTGAAAGTGAGGTGGTACCACCAAAAGAATTGGATTATTCTTTACCGAAATTTGTTACCACCGCCGAAATTGATCAAGAAACTCTCAACACCATAGACAAACACTTTTCTTCCCTTGAGGACGTAGAGCAGTTGTGA 1083 0.4229 MAAPNSNNNATPKPGTLAVGVIPTPPKSQRGHNKPKCKQCGNVARSRCPYECCKRCCSRNQNPCHIHVLKANSTFPDKSPSSGSSPHDHQPLEPPQSTSAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAVAINEWRFAKLKEYKERNIEVENEAFDRYMQNVDLLEEVLAVKSLDDDVSSALDANPSPTESNETMIPGLKLQLRSNSMRSDGLRTRIQQIVDEGLKKLERSAVDGDMDESIDEEGNKASKRGKGMERLSAISDLMDKINKARSEEDLKSCLEMKSQLFNLDEGSCVIDDLKDNEIIENQTAESEVVPPKELDYSLPKFVTTAEIDQETLNTIDKHFSSLEDVEQL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1538g00003 360 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 17 360 - -
Vium1538g00003 360 Pfam Domain of unknown function (DUF702) 36 69 - -
Vium1538g00003 360 MobiDBLite consensus disorder prediction 1 36 - -
Vium1538g00003 360 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1538g00003 Vium-Chr1538 59783 65348 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Vium1538g00003 DUF702 1.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1538g00003 - - gmx:100816049 585.874