Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1538g00002 ATGGCGGCACCCAACAGCAACAACAACGCGACGCCGAAGCCCGGAACCCTAGCCGTTGGTGTAATCCCTACTCCGCCTAAGTCTCAACGCGGCCACAACAAGCCCAAGTGCAAACAGTGTGGCAATGTCGCTCGTTCAAGGTGTCCCTATGAATGTTGCAAGAGATGCTGTTCTAGAAATCAAAATCCTTGCCACATCCATGTGTTAAAAGCTAATTCGACTTTTCCCGACAAGTCACCCTCATCTGGTAGCTCTCCACATGATCACCAACCCTTAGAACCTCCTCAATCAACTGCAGGAAGAGTTGCATCACTTAGACAACTTTCAAATAGTTTTGCTCAGTTCAATAATTTACACCTTTCACTTCGTTCGAAGAAGCCATTGACTAGAAAGGATGCTGTAGCTATCAACGAATGGAGATTTGCCAAGTTAAAAGAATACAAGGAACGGAATATTGAAGTGGAAAATGAAGCTTTTGACCGATACATGCAGAATGTAGATTTACTGGAAGAAGTATTAGCAGTGAAGTCGTTGGATGACGATGTATCGTCTGCATTGGATGCTAATCCTAGTCCAACGGAGAGCAATGAGACAATGATCCCAGGGCTAAAATTGCAGCTAAGATCAAACTCTATGAGAAGTGATGGTTTGAGAACGAGAATACAACAAATCGTAGATGAGGGATTAAAGAAGCTTGAGAGAAGTGCTGTAGATGGTGACATGGATGAATCAATTGATGAAGAAGGCAATAAAGCTTCAAAAAGGGGAAAGGGGATGGAAAGGTTATCAGCTATAAGTGATCTTATGGATAAGATCAATAAAGCCCGAAGTGAGGAGGATTTGAAGTCGTGCTTAGAGATGAAGTCCCAACTCTTCAATTTGGACGAAGGATCTTGCGTGATAGATGATCTTAAAGACAATGAAATTATTGAGAATCAAACTGCTGAAAGTGAGGTGGTACCACCAAAAGAATTGGATTATTCTTTACCGAAATTTGTTACCACCGCCGAAATTGATCAAGAAACTCTCAACACCATAGACAAACACTTTTCTTCCCTTGAGGACGTAGAGCAGTTGTGA 1080 0.4231 MAAPNSNNNATPKPGTLAVGVIPTPPKSQRGHNKPKCKQCGNVARSRCPYECCKRCCSRNQNPCHIHVLKANSTFPDKSPSSGSSPHDHQPLEPPQSTAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAVAINEWRFAKLKEYKERNIEVENEAFDRYMQNVDLLEEVLAVKSLDDDVSSALDANPSPTESNETMIPGLKLQLRSNSMRSDGLRTRIQQIVDEGLKKLERSAVDGDMDESIDEEGNKASKRGKGMERLSAISDLMDKINKARSEEDLKSCLEMKSQLFNLDEGSCVIDDLKDNEIIENQTAESEVVPPKELDYSLPKFVTTAEIDQETLNTIDKHFSSLEDVEQL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1538g00002 359 MobiDBLite consensus disorder prediction 75 99 - -
Vium1538g00002 359 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 17 359 - -
Vium1538g00002 359 MobiDBLite consensus disorder prediction 1 36 - -
Vium1538g00002 359 MobiDBLite consensus disorder prediction 75 92 - -
Vium1538g00002 359 Pfam Domain of unknown function (DUF702) 36 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1538g00002 Vium-Chr1538 59783 65348 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Vium1538g00002 DUF702 1.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1538g00002 - - gmx:100816049 579.711