Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1526g00025 ATGGATTTGGTGGAGGAGAAGAGGAAGCAGCGAGAATTTGCATTAGCGTCGGTGTCTGAGGTTTCTTCTTCTTCCTCTTCATCTTCTTTGTCGGGTGTTGCTGTGTTCGCTGGTGACCGTCTTCAAATTCGGAACGAATCTAACCTTATTCTTCTCAGTGCTCATCTTACAGATGTTCAGCCATTCAGGTTAGGTCCTATTGAATCTGTTTGCATGGTGGAAGGGTCTGATGCGGACAAACAGACATCGTATTCCAGTGGAGTCGCTATACAGTTTAGAAATGTGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGAAATTTACCAAATGGAACTAATGTAATAACTTCTAAAAGCAAGTTTGATGAGAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAACAAAATATGTTGCAGGACTATGTGAGAACAGGAACCTATTATGCTGCAGTTATTGAGAATCGGTCAGATTTCATGGGCCGTGTAGTAGTTGATGTTGGTGCTAGTAGTGGAATTTTGTCATTATTTGCTGCCCAGGCAGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGTAAACTTATAGCTGGGAACCCAATACTCGGACAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAACTGCCTGAGAGAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTGGAGTCTTATGTCATTGCAAGGGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTAGTGTAGGAAGGATTCACATGGCTCCCTTCAGCGATGAATATTTGTTCGTTGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAAAACTATTATGGCGTTGATTTGACGCCCTTACATGGTACTGCCTTCCAAGGATACTTTTCTCAGCCTGTGGTCGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCTATGTTCCATGTGATAGACTTTACCAAAATAAAGGAAGAGGAGCTATATGAAATTGACATTCCTCTTAGATTCATAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCTTGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGCTCGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCACAGCCAATATATGTTGTGGCAGGGCAAGAAATCACTGGCAGGATGCACTTGATTGCCCACACTGCGCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAACATGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATCCATTAAACCAAGATCAGCAACCTCAAGTACTTCTACCGACACAAGATATAAACATCCAATCTCAAGATTTGGATGAGGTGGAGATGATGCAGCAGCCTTCGCCCAAGTCCTGTGCTCAAATTGACTCCCTCATGCAGAATGCATAA 1611 0.4271 MDLVEEKRKQREFALASVSEVSSSSSSSSLSGVAVFAGDRLQIRNESNLILLSAHLTDVQPFRLGPIESVCMVEGSDADKQTSYSSGVAIQFRNVEESEAFHCVFQQWKKEFNVQGGNLPNGTNVITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRSDFMGRVVVDVGASSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPERADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFIATVGARLHGLACWFDVLFNGSTARRWLTTAPGSPTTHWYQLRCVLSQPIYVVAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLNQDQQPQVLLPTQDINIQSQDLDEVEMMQQPSPKSCAQIDSLMQNA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1526g00025 536 CDD AdoMet_MTases 183 283 - -
Vium1526g00025 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Vium1526g00025 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 114 467 IPR025799 GO:0016274|GO:0018216
Vium1526g00025 536 FunFam Probable histone-arginine methyltransferase CARM1 286 493 - -
Vium1526g00025 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 252 - -
Vium1526g00025 536 FunFam Probable histone-arginine methyltransferase CARM1 124 284 - -
Vium1526g00025 536 Gene3D Vaccinia Virus protein VP39 123 284 IPR029063 -
Vium1526g00025 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Vium1526g00025 536 Gene3D - 286 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1526g00025 Vium-Chr1526 203450 211118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1526g00025 144 433 C2H2 Transcription Factor Family AT3G12270 33.016 2.24e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1526g00025 K05931 - gmx:100818828 974.541