Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1525g00002 ATGGCTGACGAGATCAATCGCGGAACGTCCGTGGACTCCACTGAATCACGCTGGGTTTTCCAGGACGACGACGATGACTCCGATTTAGAGAACTTCGACGCGGATTTGAGATTTGGACGCCAAGCTGCGGTCGTTGATTCCGACGAGGAAGAGGACAACGCGGAGCAGAGACTCATCCGCACTGGTCCTCGCGTCGATTCATTCGACGTGGAGGCTCTTGAAGTTCCCGGTGCTCACAGAAGTGACTATGAGGACATCAGTGTGGGTAAGAAAATTGTATTAGCTATTCAGACGCTTGGTGTTGTCTTTGGTGACGTTGGAACAAGTCCCTTGTATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCTTTATCACTTGTCTTGTACACATTAATCTTGATTCCTTTATTGAAGTATGTCCTGGTGGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACGTTTGCCTTGTACTCGTTGATCTGTCGTCATGCTAAGGTTAGTCTTCTCCCTAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTTAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTGACTCTGAAGAAGATTCTACTAATATTAGTTCTTACTGGTACTTCCATGGTGATTGCTAATGGTGTTGTTACACCGGCAATGTCAGTACTGTCATCTGTTGGCGGTTTAAAAGTTGGGGTAGATGCTATCGAGAAAGATGAAGTGGTGATGATTTCAGTTACCTGCCTTATCATTTTGTTCAGTGTGCAAAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCTCTTGCCAGCATTGGGATATACAATCTTGTGAAGTATGACAATAGTGTCTTAAGGGCATTTAATCCTATTCATATCTACTACTTCTTCAAAAGGAACTCAACCAAAGCATGGTATTCTCTTGGGGGTTGCCTACTGAGCGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCCACTTTTCTGTCCGATCAGTTCAGCTTTCATTTGTCTTCCTTGTTTTGCCGTGCCTGCTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGTCTTTTTTTCTTCTGTTCCGAGTGGTGCGTTCTGGCCAGTTTTCTTTATTGCCAACGTGGCTGCACTTATTGCTAGTCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATTATACATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTCCTCTTGGGGCTTTCCCTGGTGCTTGTCTGCACTATATCTAGCATTGATGAGATTGGAAATGCCTACGGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTACTTATATGGCAGTTACACATCATCATAGTGCTTAGTTTCGTGGTAGTCTTCTTGGGATTGGAATTAACTTTTTTTTCATCTGTCCTGTGGAGTGTGACAGATGGAAGCTGGATTATATTGGTCTTTGCCATAATCATGTTTCTTATAATGTATATATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCGAAAGCTGTCAACAGATTTGATGAGAGAATTAGGTTGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTTTATAATGAGTTGGTCAAAGGAATACCAGCAATTTTTGGCCATTTTCTAACCACACTTCCTGCAATACACTCTATGATCATATTTGTGAGTATCAAGTATGTTCCTGTTCCTATGGTACCGCAAAGTGAAAGGTTTCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGGAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTAGAGAAGTTTATTCGTCGTGAGGCTCAGGAGAGGTCATTGGAGAGTGACGGGGATGATGATTCTGATTCAGAGGATGAGTACCCTCGTTCTAGGGTTCTCATAGGTCCCAATGGGAGTGTTTACTCACTTGGTGTTCCTCTTCTCGCTGATTATAAGGATACAAGCAACCCCGTTTTAGAAGCAAGCACGTCAGAGGTGATAAGCTCCGTATTTCCTGACCCCAGTGTGTGTGACGCCGAGCAGAGCCTTGAGAGCGAGTTATCTTTTATTCACAAGGCTAAAGAATGTGGTGTTGTTTATCTTCTGGGTCACGGGGATATAAGAGCAAGGAAGGACTCGTGGTTTATCAAGAAGTTAGTTATAAACTATTTTTATGCTTTTTTGAGAAAGAATTGCAGAAGGGGAATCACGACTTTAAGTGTACCACACTCAAATCTTATGCAAGTTAGCATGACTTACATGGTGTGA 2523 0.4281 MADEINRGTSVDSTESRWVFQDDDDDSDLENFDADLRFGRQAAVVDSDEEEDNAEQRLIRTGPRVDSFDVEALEVPGAHRSDYEDISVGKKIVLAIQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLENSLTLKKILLILVLTGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEKDEVVMISVTCLIILFSVQKYGTSKVGLAVGPALFLWFCSLASIGIYNLVKYDNSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLSATGSEAMFADLCHFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQVFFSSVPSGAFWPVFFIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLGLSLVLVCTISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIIVLSFVVVFLGLELTFFSSVLWSVTDGSWIILVFAIIMFLIMYIWNYGSNLKYETEVKRKLSTDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDSDSEDEYPRSRVLIGPNGSVYSLGVPLLADYKDTSNPVLEASTSEVISSVFPDPSVCDAEQSLESELSFIHKAKECGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSNLMQVSMTYMV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1525g00002 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 90 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1525g00002 840 MobiDBLite consensus disorder prediction 1 26 - -
Vium1525g00002 840 MobiDBLite consensus disorder prediction 695 718 - -
Vium1525g00002 840 NCBIfam potassium uptake protein 94 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium1525g00002 840 Pfam K+ potassium transporter 96 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1525g00002 Vium-Chr1525 3066 8828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1525g00002 9 840 Inorganic Solute Cotransporters AT5G09400 78.979 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1525g00002 - - gmx:100788008 1485.7