Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium151g00007 ATGGCAAATTCAAAGGGCTCATCAGGTTTCAGAAATTTTATGTATCCTGGAAAGCATGCTCTACTGCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCGTACTCTGATTATGTCCAAAATCCTGCTGTTGGTTTAAAGGGTGGTAACAGGCCTAGAGACGGAAATCCACACCACCAACGTACATCATCTGAGAGCCTTGTTATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTTAATGAGCCAGAAACACCTGTCCGAAGAGCTGGACATCGGCGTTCATCGAGTGATTCTTTTGCGTACCTAGACATGGCTAATGCATCTAACATCAATTATGCTGATCAGGACGAGTATAAATATAAGAGTTTGATGTCTATTCCGTCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGCCATCTACCTGCTTATGTGGATATGAACTTATCTAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCAGTTGGTGTTCCCTCTGGCAAAGACAGTTCAGCTTTTCAGAGTTCAGGATTGCCAAGCACACCACAGGAAGCAGACGGGCTTCCACCTACTGCAACTGAAAAGCAAGATTCAGTAGAACCTGGATTTCAGGATGCAAAATCGTTTTCTGAAAAAAAGGACAATTCACATGCAAAGTCATCTTCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAGCGTTCACGGGTTAGGAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGATCTGAAGTCTCAGCTGAGCTTGAGTTTCTTAATCAACAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTATCAGCAGCAGCATCAGCCACAGACGCAGCCACAACAGCAACCATCTAGTAGTCACAGACGCTCGAACAGCAGAGACCTCGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGATACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1128 0.4309 MANSKGSSGFRNFMYPGKHALLPPKSPFPSVSQAYSDYVQNPAVGLKGGNRPRDGNPHHQRTSSESLVIEEQPSWLDDLLNEPETPVRRAGHRRSSSDSFAYLDMANASNINYADQDEYKYKSLMSIPSWSSQDFDRSKDARHLPAYVDMNLSKQKNRSWDSFSNAMTNPVGVPSGKDSSAFQSSGLPSTPQEADGLPPTATEKQDSVEPGFQDAKSFSEKKDNSHAKSSSSETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRALYQQQHQPQTQPQQQPSSSHRRSNSRDLESQFANLSLKHKDTNSGQDPALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium151g00007 375 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Vium151g00007 375 MobiDBLite consensus disorder prediction 215 242 - -
Vium151g00007 375 MobiDBLite consensus disorder prediction 326 344 - -
Vium151g00007 375 MobiDBLite consensus disorder prediction 39 69 - -
Vium151g00007 375 Coils Coil 248 303 - -
Vium151g00007 375 Gene3D - 227 303 - -
Vium151g00007 375 MobiDBLite consensus disorder prediction 158 244 - -
Vium151g00007 375 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Vium151g00007 375 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Vium151g00007 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
Vium151g00007 375 MobiDBLite consensus disorder prediction 326 375 - -
Vium151g00007 375 MobiDBLite consensus disorder prediction 351 366 - -
Vium151g00007 375 MobiDBLite consensus disorder prediction 158 191 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium151g00007 70 307 bZIP Transcription Factor Family AT3G58120 31.349 8.07e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium151g00007 - - gmx:100813098 648.662