Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15158g00005 ATGGAGAATCGGAAGACATCAGCGTACTACGAGAACAGAGCGGTGCAGTTCGGGGTAGTGAGCACCGATTGGCTTGCTCAGGCTCAGTCCGCCACTGTCCCTCGTACCCCTTCTCCTCCTCCTCCATCTCCTCCTCTTCCTCCTTCCCACAATGACGCCGACGAACCCTTCTCCGTCATCCAGGAGTTCGACACCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGTGCCTTGGCCGCCGTTATCCGCTCCAGCAAGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAAGCGCCTCTGATTCCCTCAAATGTTGGGATACAACCTCAATCTCCTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGGACTTCCGCTCTCGAGTACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAATCATTGCAATGCTGAGCCAGGATTTTATATTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTGCTTCAGATTCTCAAACTCGCTGCACAGAATAACAAGCTCTTTAGAGTCTTGTGCACAGAGGGGAGACCAGATAGAACGGGTTTGCGGTTTTCCAATGAGCTGGCGAAGCTTGATGTGACTGTGAAACTTGTTATAGACTCTGCAGTGGCTTATACTATGGATGAGGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGAACTTACCAAATTGCAATGGTGGCTAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGTTACAAGTTTGCTCGATTTTACCCTCTGGATCAAAAGGATTTGGCCCCTGCCTTACGCCCTGTTGATTTTGGTGTGCCTGTTCCATCCAAGGTTGAGGTTGAATGTTCTGCGCGGGATTATACTCCTCCACAGTATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATACTTGTAG 1071 0.5023 MENRKTSAYYENRAVQFGVVSTDWLAQAQSATVPRTPSPPPPSPPLPPSHNDADEPFSVIQEFDTWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIQLKSASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKAREIIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNNKLFRVLCTEGRPDRTGLRFSNELAKLDVTVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPVPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15158g00005 356 Gene3D - 55 157 IPR042528 -
Vium15158g00005 356 Pfam Initiation factor 2 subunit family 70 344 IPR000649 GO:0044237
Vium15158g00005 356 MobiDBLite consensus disorder prediction 34 51 - -
Vium15158g00005 356 FunFam Translation initiation factor eIF-2B subunit alpha 55 157 - -
Vium15158g00005 356 Gene3D - 160 356 IPR042529 -
Vium15158g00005 356 MobiDBLite consensus disorder prediction 28 54 - -
Vium15158g00005 356 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 356 - -
Vium15158g00005 356 FunFam Translation initiation factor eIF-2B subunit alpha 160 356 - -
Vium15158g00005 356 SUPERFAMILY NagB/RpiA/CoA transferase-like 68 355 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15158g00005 Vium-Chr15158 16697 18815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15158g00005 7 356 Eukaryotic Initiation Factors Gene Family AT1G53880 78.592 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15158g00005 K03239 - gmx:102669842 613.224