Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15158g00002 ATGGAGAATCGGAAGACATCAGCGTACTACGAGAACAGAGCGGTGCAGTTCGGGGTAGTGAGCACCGATTGGCTTGCTCAGGCTCAGTCCGCCACTGTCCCTCGTACCCCTTCTCCTCCTCCTCCATCTCCTCCTCTTCCTCCTTCCCACAATGACGCCGACGAACCCTTCTCCGTCATCCAGGAGTTCGACACCTGGCGCAAGCACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGTGCCTTGGCCGCCGTTATCCGCTCCAGCAAGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAAGCGCCTCTGATTCCCTCAAATGTTGGGATACAACCTCAATCTCCTTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGGACTTCCGCTCTCGAGTACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAATCATTGCAATGCTGAGCCAGGATTTTATATTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTGCTTCAGATTCTCAAACTCGCTGCACAGAATAACAAGCTCTTTAGAGTCTTGTGCACAGAGGGGAGACCAGATAGAACGGGTTTGCGGTTTTCCAATGAGCTGGCGAAGCTTGATGTGACTGTGAAACTTGTTATAGACTCTGCAGTGGCTTATACTATGGATGAGGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGAACTTACCAAATTGCAATGGTGGCTAAGAGTATGAACAAGCCAGTTTATGTGGCTGCTGAAAGTTACAAGATGTTGACCCAGTACTCCGCTTTGCTGGGGCAACAAGTGGCAAATTAG 912 0.5143 MENRKTSAYYENRAVQFGVVSTDWLAQAQSATVPRTPSPPPPSPPLPPSHNDADEPFSVIQEFDTWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIQLKSASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKAREIIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNNKLFRVLCTEGRPDRTGLRFSNELAKLDVTVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKMLTQYSALLGQQVAN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15158g00002 303 Gene3D - 160 300 IPR042529 -
Vium15158g00002 303 MobiDBLite consensus disorder prediction 34 51 - -
Vium15158g00002 303 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 294 - -
Vium15158g00002 303 MobiDBLite consensus disorder prediction 28 54 - -
Vium15158g00002 303 FunFam Translation initiation factor eIF-2B subunit alpha 55 157 - -
Vium15158g00002 303 Gene3D - 55 157 IPR042528 -
Vium15158g00002 303 Pfam Initiation factor 2 subunit family 70 293 IPR000649 GO:0044237
Vium15158g00002 303 SUPERFAMILY NagB/RpiA/CoA transferase-like 56 293 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15158g00002 Vium-Chr15158 8731 18815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15158g00002 7 290 Eukaryotic Initiation Factors Gene Family AT1G72340 75.352 7.07e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15158g00002 K03239 - gmx:102669842 481.485