Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15131g00010 ATGGATAAGGACTCAAACATCAGAACCTACCCTGATATAGGTGAACTCGCATTTGGAAAGACAGGAAGACTGATAGTGTCAATATCCATGTACACGGAACTATATCTGGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATATTCCCCATTGGAGAGGTTCACATAGCAGGCTTAGCAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTATCATCTTGCCCACGGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCGTTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCTCATCCTGTCTTTCCCACACTGTACAATTCGATGACAAACAAACATCAGTTCTCTAACGTCCTACTTGTTTGTTTTCTCCTAACCACCGTGGGTTATGCATCCATGGCTATAGTGGGTTATTTAATGTTTGGTGACGGGGCTGAATCTCAAGTAACATTGAACCTGCCTCTGGACAAACTCAGCTCAAAATTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGATTTGCTTCCAAAGACGTACAAGAATAGGGTGACGAGTATCTTACTGAGCACAGTGTTGGTATTGAGCACCACCGTTGTTGCCCTTGCTGTCCCTTTCTTTGGGTCTCTCATGTCGCTGGTTGGAGCCTTTCTGAGTGTCACAGCTTCTATTCTGCTTCCGTGCTTGTGCTACTTGAAGATTTCGGGCACTTACAGGAAATTTGGGTGTGAGACGGTAGCCATAGTGATAATAATAATGACAGCTATTGTAATGGCAATATCAGGGACCTACATCTCTCTCATGGAAATAGCTCACAATTTATAA 1008 0.4216 MDKDSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNIFPIGEVHIAGLAIGGKQLFVIMVALIILPTVWLDNLSLLSYVSASGVFASVLIILSITWTATFDGVGFHHKGTLVRWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIVGYLMFGDGAESQVTLNLPLDKLSSKLAIYTTLVNPISKFALMATPITNALKDLLPKTYKNRVTSILLSTVLVLSTTVVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVAIVIIIMTAIVMAISGTYISLMEIAHNL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15131g00010 335 Pfam Transmembrane amino acid transporter protein 3 326 IPR013057 -
Vium15131g00010 335 PANTHER OS05G0424000 PROTEIN-RELATED 8 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15131g00010 Vium-Chr15131 21987 23674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15131g00010 1 331 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.036 3.68e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15131g00010 K15015 - gmx:100794374 551.592