Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium15131g00009 ATGGATACCGCCAACAGTCAACTAAACCATAACCTTAACATGCCCCTAATCCAAGACCAAACACTACGCTGTCATGAACCCACCCAAAATCCTCAGACAGGTTCTCCAAATGTTTATGCCACCACATCTTTCCTCGGCACTTGTCTCAATGGACTCAATGCTATGTCAGGTGTTGGCATACTCTCGGTTCCTTATGCTCTTGCAACAGGAGGCTGGTTAAGCTTGGTTCTTCTGTTTTCTATTGCCGCTGCTGCATTTTACACGGGCCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATCAGAACCTACCCTGATATAGGTGAACTCGCATTTGGAAAGACAGGAAGACTGATAGTGTCAATATCCATGTACACGGAACTATATCTGGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATATTCCCCATTGGAGAGGTTCACATAGCAGGCTTAGCAATTGGTGGGAAGCAATTATTTGTGATTATGGTTGCCCTTATCATCTTGCCCACGGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTCTTTGCTTCTGTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTCCGTTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCTCATCCTGTCTTTCCCACACTGTACAATTCGATGACAAACAAACATCAGTTCTCTAACGTCCTACTTGTTTGTTTTCTCCTAACCACCGTGGGTTATGCATCCATGGCTATAGTGGGTTATTTAATGTTTGGTGACGGGGCTGAATCTCAAGTAACATTGAACCTGCCTCTGGACAAACTCAGCTCAAAATTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGATTTGCTTCCAAAGACGTACAAGAATAGGGTGACGAGTATCTTACTGAGCACAGTGTTGGTATTGAGCACCACCGTTGTTGCCCTTGCTGTCCCTTTCTTTGGGTCTCTCATGTCGCTGGTTGGAGCCTTTCTGAGTGTCACAGCTTCTATTCTGCTTCCGTGCTTGTGCTACTTGAAGATTTCGGGCACTTACAGGAAATTTGGGTGTGAGACGGTAGCCATAGTGATAATAATAATGACAGCTATTGTAATGGCAATATCAGGGACCTACATCTCTCTCATGGAAATAGCTCACAATTTATAA 1293 0.43 MDTANSQLNHNLNMPLIQDQTLRCHEPTQNPQTGSPNVYATTSFLGTCLNGLNAMSGVGILSVPYALATGGWLSLVLLFSIAAAAFYTGLLIKRCMDKDSNIRTYPDIGELAFGKTGRLIVSISMYTELYLVSIGFLILEGDNLSNIFPIGEVHIAGLAIGGKQLFVIMVALIILPTVWLDNLSLLSYVSASGVFASVLIILSITWTATFDGVGFHHKGTLVRWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIVGYLMFGDGAESQVTLNLPLDKLSSKLAIYTTLVNPISKFALMATPITNALKDLLPKTYKNRVTSILLSTVLVLSTTVVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVAIVIIIMTAIVMAISGTYISLMEIAHNL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium15131g00009 430 PANTHER OS05G0424000 PROTEIN-RELATED 50 412 - -
Vium15131g00009 430 Pfam Transmembrane amino acid transporter protein 41 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium15131g00009 Vium-Chr15131 21987 29474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium15131g00009 29 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.897 3.76e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium15131g00009 K15015 - gmx:100794374 654.44