Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1507g00001 ATGGGTACCTGCCTTATGTGTCAATGTTCGTTTGATGATTACACTTCTCGCTGCCGGTGTACTTATTGCAGAATGCTTGTTTTGGTGTGCCGTAGTTGCGAGAGTGAATCTACCGTGTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGAGTCAGCACAGCTAATTGAAATTGGAGAATCAAAAACATCATTGTCGGGTGCCGAGTTCAACAACTTTTGTTCAGATTTGCCTCGAGTGCCCAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTACATGGGTTTCGGCAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTAAAGAAAATCACTGAATTTGTTTTTGTTGATGCTCCCCATGAATTGCCATTCATTTACCAAACCCCCATGTTTGAGTCAAATGAAAATTGTGCATCATCATCATTGCCATCTAGTCCTCCACCACCATTGGCGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGCAGTGGTGTTGACTGGAAGGTAGCAAATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGCTGGATATGATGTTTCACTATCACACTTAAAGAATATCTTTTCCCGGGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCAGCACTACAAGAAGAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAAGCCATGGAGTGTGGCCCTATCAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGACGGTGATTGTTCTGCGATAGTTGAGCATGATAATGGTCATATAATTCCTACTCGGTCCCCATGTATTGATGAGATCAAGGATTTTCTTAATGGCTTTCTGTAG 1008 0.4315 MGTCLMCQCSFDDYTSRCRCTYCRMLVLVCRSCESESTVYVCELCQKQGKAESAQLIEIGESKTSLSGAEFNNFCSDLPRVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFVDAPHELPFIYQTPMFESNENCASSSLPSSPPPPLANCKKKFAWFVAPNFDGSSGVDWKVANGPFDPLQYQQQTAGYDVSLSHLKNIFSREGPFDGILGFSQGAAMAALISALQEELKGEMDFKFVVLCSGFALRMKAMECGPIKCPSLHIFGNEHGKDRQIANQTSKELASLYDGDCSAIVEHDNGHIIPTRSPCIDEIKDFLNGFL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1507g00001 335 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 1 334 IPR020936 -
Vium1507g00001 335 FunFam esterase OVCA2 isoform X6 89 335 - -
Vium1507g00001 335 Gene3D alpha/beta hydrolase 89 335 IPR029058 -
Vium1507g00001 335 Pfam Serine hydrolase (FSH1) 90 326 IPR005645 -
Vium1507g00001 335 SUPERFAMILY alpha/beta-Hydrolases 89 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1507g00001 Vium-Chr1507 179 2987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1507g00001 1 335 Sulfurtransferasese or Rhodanese AT1G09280 56.047 6.76e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1507g00001 - - vum:124826676 692.189