Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1501g00007 ATGGCGTCTTCGGCGTGTGTGACGGACTTGGCTCGAACGACGGCGTGCAGGGACGGTGCGGCGGCGGCGCATCTCAAAGTGGTGTCAATCTTCGTTATCTTCGTGACGAGCGTGGTGGGGATGTCGTCGCCGGTACTCCTAGCCGGGATCTTCCGCGGGAAGCCGCTCTACGACAAGGCCATAGTCGTGATCAAGTGTTTCGCGGCGGGGGTGATTCTCTCGACCTCGCTGGTCCACGTGCTCCCAGACGCGTACGCCGCACTCGCCGACTGCCAGGTGGCGTCGCGCCACCCGTGGAAGGACTTCCCTTTTGCGGGGCTCGTGACGCTTGTGGGCGCTCTTCTGGCGCTCCTGGTGGACCTCGCGGCGAGCTCGCACGTGGAGCACGCGCAGTACTCGCCGGTGGTGGCGCAGGAGAAGGAGTTGGAGCTCGGCGGAGGCTGCCATGGGTCCGGCGGCGATGGTGAAAGAGGTGAAGAATTGGTGAAACTGAAACAGAGGTTGGTTTCGCAGGTGCTTGAGATTGGGATTATTTTTCACTCTGTGATAATCGGAGTTACCATGGGAATGTCTCAGAACGTTTGCACTATTCGACCTCTCGTTGCTGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGATGCGTCGCTCAGGCTGGATTTAGCTTTGGAACAACTGCGTACATGTGTTTGATGTTTGCCGTGACAACACCAATGGGAATAATGTTGGGGATAATATTGTTCTCACTGACAGGTTACGATGATAGCAATCCAAATGCTTTAATTTTGGAAGGACTACTGGGTTCAGTTTCATCTGGAATACTAATTTACATGGCCTTGGTTGATCTTATAGCAGTTGACTTTTTTCATAACAAGCTTATGAACTCTACTACTCGGTTGAAGAAAATATCTTTTGTTGCTTTGACTCTTGGTTCTGCTGCAATGTCTATCCTTGCCCTATGGGCTTGA 978 0.5307 MASSACVTDLARTTACRDGAAAAHLKVVSIFVIFVTSVVGMSSPVLLAGIFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCQVASRHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYSPVVAQEKELELGGGCHGSGGDGERGEELVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTTAYMCLMFAVTTPMGIMLGIILFSLTGYDDSNPNALILEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSTTRLKKISFVALTLGSAAMSILALWA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1501g00007 325 Pfam ZIP Zinc transporter 24 322 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium1501g00007 325 NCBIfam ZIP zinc/iron transport family 13 325 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium1501g00007 325 PANTHER ZINC/IRON TRANSPORTER 22 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1501g00007 Vium-Chr1501 160236 162505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1501g00007 1 325 Inorganic Solute Cotransporters AT2G30080 68.622 2.06e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1501g00007 K14709 - gmx:100797310 509.22