Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14955g00001 AGAGGTGTAGTGGAACAATGGCTGGAAGTTGAAGCACATAACTTTAATCCACCGGCGTATGATTTGGCCGTGCATGTTCTGTTTGGTCCATTATTAGGCATCACTCCAGATCCAAAGGTGGCGGAAGAGAGTGAAGCAAAGCTGGTGAAGGTGTTGGATGTTTATGAGGAGAGACTGTCAAAGAGCAAGTATCTGGGTGGGGATTTCTTCAGTCTTGCTGACATAAGTCATCTTCCATTCACAGATTACATTGTGAATAAGATGAATAAAGGGTATTTGATTAAAGAGAGGAAGCATGTGAGTGCTTGGTGGGATGAGATAAGCAGTAGACCGTCGTGGAAGAAGGTTATCGAACTCTACCAACCTCCGATCTAG 375 0.4427 RGVVEQWLEVEAHNFNPPAYDLAVHVLFGPLLGITPDPKVAEESEAKLVKVLDVYEERLSKSKYLGGDFFSLADISHLPFTDYIVNKMNKGYLIKERKHVSAWWDEISSRPSWKKVIELYQPPI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14955g00001 124 SUPERFAMILY GST C-terminal domain-like 1 116 IPR036282 -
Vium14955g00001 124 FunFam Glutathione S-transferase F2 1 117 - -
Vium14955g00001 124 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 118 - -
Vium14955g00001 124 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 124 IPR010987 -
Vium14955g00001 124 Gene3D - 1 117 - -
Vium14955g00001 124 Pfam Glutathione S-transferase, C-terminal domain 24 111 IPR004046 -
Vium14955g00001 124 CDD GST_C_Phi 1 117 IPR034347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14955g00001 Vium-Chr14955 2246 2674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14955g00001 1 124 Glutathione S-transferase Gene Family AT2G30870 58.065 7.91e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14955g00001 K00799 - gmx:100819783 211.46