Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14846g00002 ATGGGTTCAAGTCAGGAAGAACTGACCCTTCTGGGAGCTAGAGTAAGCCCATTTGTTTGCAGGGTGAAGATAGCCCTGAAGTTGAAGGACGTTGAATACAAATACGTGGAAGAAAATTTGGGCAACAAGAGTGAACAGCTTCTGAAATACAACCCAGTTCACAAGAAGGTTCCAGTCCTTGTTCACGGTGAGAAACCCCTTGCAGAGTCTCTTGTGATTGTTGAGTACATCGATGAGACATGGAACAACAATCCCATCTTGCCTTCCGATCCTTACCAGAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATCGATGACAAGATTGTGGGTGCTACGTGGAAATCTGTTTTCACAGTTGATGAGAAAGAGCGTGAGAAGAATGTTGCAGAAGCATATGAGAGTCTGCAGTTTCTTGAGAATGAGATAAAAGAGAAGAAGTTCTTCGGAGGAGAGGAGCTTGGGTTGGTAGATATTGCTGCTGTCTATGTAGCATTTTGGATCCCTTTGGTTCAAGAAATAGCAGGTTTGGAGTTATTGACAAGTGAGAAATTTCCTAATCTCTACAGGTGGAGCCAAGAATTTGTGAACCATCCAATTGTGAAAGAAAGTCTTCCCCCTAGAGACCCAGTTTTTGGCTTTTTTAAAGGACGCTATGAAGGCCTTTTTGCTTCAAAATAG 678 0.4322 MGSSQEELTLLGARVSPFVCRVKIALKLKDVEYKYVEENLGNKSEQLLKYNPVHKKVPVLVHGEKPLAESLVIVEYIDETWNNNPILPSDPYQRALARFWSKFIDDKIVGATWKSVFTVDEKEREKNVAEAYESLQFLENEIKEKKFFGGEELGLVDIAAVYVAFWIPLVQEIAGLELLTSEKFPNLYRWSQEFVNHPIVKESLPPRDPVFGFFKGRYEGLFASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14846g00002 225 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Vium14846g00002 225 Coils Coil 121 141 - -
Vium14846g00002 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Vium14846g00002 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Vium14846g00002 225 CDD GST_N_Tau 8 81 - -
Vium14846g00002 225 Gene3D Glutaredoxin 1 89 - -
Vium14846g00002 225 FunFam Tau class glutathione S-transferase 87 224 - -
Vium14846g00002 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Vium14846g00002 225 Gene3D - 90 225 - -
Vium14846g00002 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vium14846g00002 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vium14846g00002 225 Pfam Glutathione S-transferase, C-terminal domain 108 198 IPR004046 -
Vium14846g00002 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vium14846g00002 225 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Vium14846g00002 225 FunFam Glutathione S-transferase GSTU6 3 87 - -
Vium14846g00002 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14846g00002 Vium-Chr14846 7074 8322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14846g00002 3 218 Glutathione S-transferase Gene Family AT3G09270 50.000 1.32e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14846g00002 K00799 - gmx:100500052 382.104