Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14840g00009 ATGGATGCCACTCACTCCATGTTCTGCAACAATGATCTGGTTAACCCCCTAAGCTCAATGGGCATGCAAGTGTCCTGCATTCTTGTCGTGTCACATATCTTCAACGTTGTGTTTAGGACTGTGGGTCAACCTGGACCAATTGCGCAGATTCTGGCTGGGTTGGCGCTAGGTCCAATGTCACACATTCCGTATATAAAGGCTACATTTTTTCCTGCTAGCTCAATAAACTACTATGAAGTTGTAAGCTTCTTTTGTCGCATAAACTTCATGTTTTTGTTTGGGTTAGAGATGAATATGCACTACGCAATGCGCAATCTGCGTAGGGTAAACCTTGTAGCTTGTGGTGGTGCCTTGATGGGTGCTGTTTTTGGTCTATCTGTCTCATTTTACTTGCATCAAGAGCTAAACACCCTTGACAATGCCCCTTTGTATTATTTTTCAATGATCATCATGCTAGTGGTGTCATACACAAGCTCCCCTATGGTGATTCGTTTGGCAGCAGAGTTGAGGTTTGCAGCATCAGACGTGGGGCGAACGGCGGTGTCATCTGCGTTGATCACAGAAATGGGGTGCTTGTTGCTCTTCAACGTCATGGTTAACTGGAGAAAAGCAAATCACATTTCTTCTGGTTTCGGTTGCCTTATAATCACTGTCGTGGTGGTTTACCTTAACCGGCACTTGGCAGTTTGGTTAAACGCAAGAAATAGAAACCAGAAGTACCTCAAGGCTCCTGAGTTGTTACTCATTCTGTTCATACTTCTGACTAGCTCAATGATAATAGAGATTTCTGGTTACAACAGTATTATTAGTTGTTTCACCATTGGTTTGTTGTTCCCCAAGGAAGGGAAAACAGCTAGAACATTGCTGCACAAACTTGGTTATTCTATTTACAACTTTGTGCTTCCGGTATATTTTGGCTACTTGGGGTTGCAGTGTGACCTGATAAATGTCTTCAAGAGCTTTCAGCGTGTGGCCAATATGGACATATTGATATTATTGAGCATTGGAAGCAAGCTTGGTGGAACTCTTATAGCTACCCGCTACCTCAAAATTCCCACTAGTGAAGGTATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCCGACCTTCTATTCATTGGTGCAGCAGCAAAGCAAGTAATTACTTTCGATTCGGAAGCGTACAATGTTCTGTTGGTATCAATAGTACTGAACACAATAATATCAGGAGTAGTTGTGGCTTTTCTAGTCAGAGGGGAAGACAAAATGTTTGCAAGCAACTACACTGCAATTGAACCACAACAAATGGAAGATGAGCTCAGAATTCTGGCTTGTGTGTATGACCCTCGTCAGGTATCTGCCATACTTGCCACAGTGCTAGCAATACATGGCTCTGGAGTATCACCATATACCACTTACTTAATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCCAACTTGTTGTACCATGAGAAAGAAACTGCTGACCTTAGCGACGATGAGGACTATGGGGGCAATGATGTGGTGGAAATCAACAATTCTTTGGATACCTTCACTGCAGAAACAAAGATTCTAGTCCACCAAAGAAGGGCAGTGTCTTCTTTCCCGTCCTTGTATGAAGATGTGTGCAATGAAGCAGAAGATCTCCAAGTGTCAGTTGTGCTACTCCCCTTCCACAAGCACCAACGCATTGATGGGAAATTGGAAAGTGGAAAAGAGGGTATAAGGATCACCAACCAGAAGGTGCTAAGACATGCCCCTTGTTCAGTTGGTATCATAGTGGAAAGAGGCCTTGCAAGGGTACCTGGCTTCTCACAGCTAGTAGCATCTGAAGGCATACAAAACATTGCAACACTTTTCTTCGGTGGCCCTGATGATCGTGAGGCTATTGCATGGAGCCTACGCATTTCAGGAAGTCCACGCGTGAACTTAACGATCATAAGATTTTTGCTGACTTCTTCATCACAGAACGAACAGATAGAGAGTGGACAATCAGAGGAAAAGGAAATTTTGATGTCACTGTCTGGGGAGGAGACTGTGAACGAGATTGACAACACATTCATGGTGGACTTCTACAACAGGTATGTGACTTCAGGCCAAATAGGGTATGTGGAAAAGTTTGTGAAGCATGGAGCAGAAACGGTGGATGCTTTGAAAGAGATAGGGGACATGTATTCTTTGTTTATAGTAGGAAAAGGTGGTAGAGGGCAAAGTTCACTAACAATTGGTATGAGTGACTGGGAAGAATGCCCAGAACTGGGAACTGTTGGTGATGTTTTGGCCTCTTCAGACTTCGACATTCATGGCTCAGTTTTGATTGTTCAGCAACATAGAGATGTCAAGAAAGGCCTATTGCATGATTAG 2349 0.433 MDATHSMFCNNDLVNPLSSMGMQVSCILVVSHIFNVVFRTVGQPGPIAQILAGLALGPMSHIPYIKATFFPASSINYYEVVSFFCRINFMFLFGLEMNMHYAMRNLRRVNLVACGGALMGAVFGLSVSFYLHQELNTLDNAPLYYFSMIIMLVVSYTSSPMVIRLAAELRFAASDVGRTAVSSALITEMGCLLLFNVMVNWRKANHISSGFGCLIITVVVVYLNRHLAVWLNARNRNQKYLKAPELLLILFILLTSSMIIEISGYNSIISCFTIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSFQRVANMDILILLSIGSKLGGTLIATRYLKIPTSEGIFLGFILNTRGYADLLFIGAAAKQVITFDSEAYNVLLVSIVLNTIISGVVVAFLVRGEDKMFASNYTAIEPQQMEDELRILACVYDPRQVSAILATVLAIHGSGVSPYTTYLMHLIELVKKIKSNLLYHEKETADLSDDEDYGGNDVVEINNSLDTFTAETKILVHQRRAVSSFPSLYEDVCNEAEDLQVSVVLLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGIIVERGLARVPGFSQLVASEGIQNIATLFFGGPDDREAIAWSLRISGSPRVNLTIIRFLLTSSSQNEQIESGQSEEKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKHGAETVDALKEIGDMYSLFIVGKGGRGQSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIVQQHRDVKKGLLHD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14840g00009 782 Pfam Sodium/hydrogen exchanger family 27 412 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium14840g00009 782 PANTHER CATION/H + ANTIPORTER 10 773 - -
Vium14840g00009 782 Gene3D - 19 419 IPR038770 -
Vium14840g00009 782 FunFam Cation/H(+) antiporter 1 19 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14840g00009 Vium-Chr14840 10126 12992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14840g00009 11 782 Antiporter Super Family AT1G79400 38.974 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14840g00009 K26731 - gmx:100804522 1393.25