Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14793g00001 ATGCGTAGGTGGTTAGTTTCCGAGGCAGAGGCAATAAACCTTTTTACCAGAATTTTTGTTTCATTCAAAACTGGAGCTGTGAAGGGTAATTGCCTCCATGTCTCTATCTGCACTGAAAAGTTGGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTGGCTGACACTCAGAAAGAATTGGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCCACCCATTCACAGTCCAACGAGGAGAGATCATCACCAACCACAGATCCTAAAAAAACTGACAATGCATCTGATGCAAACAACCAGCAGTTGGCTCTTGCTCTACCTCATCAAATTTCCCCTCAGCAGCAGCCTGCAGCGCCTCCTGCTCAGGCTCAGGCACCTGCATCAAATGTGACTCAAGCCCCTCAGCAACCTCCTTATTACATGCCTCCCACCCCTCTGCAGAATACACCTGTGCCCCAGAACCAGTATTTGCCTTCTGATCAACAATATCGAACTCCCCAACTTGTGGCCCCACAACCAACACCATCTCAAGTAACACCCACCCCACCCGTGCAACAATTTTCTCACTATCAACAGCAACAGCCACAACCTCAACAACAACAGCAGCAGCTCCAGCAGCAACAACAGTGGTCACAGCAGGTGCCATCACCTCAGCCACCCTCAATGCAATCTCAAACAAGACCCCCCTCTCCAGCTATGTACCCTCCATACCAGCCGAACCAAGCAACAAACCCATCACCTGCAGAAACACTTCCAAACAGCATGCCCATGCAAGTGCCGTATTCAGGAGTTCCACCGCCAGGATCTAGCCGAGCTGACACAATACCATATGGATATGGAGGAGCTGGAAGAACAGTTCAACAACAGCCTCCACCCCAGCAGATGAAGGGTTCTTTTCCTGCACCACCAAGTGAAATGTATGGACCTACTGGTTCTCTCCCGGCCCTTCCTCCTCCTGGTAGTGCATACATGATGTATGAGGGTGAGGGAGGAAGAACACATCATCCACCACAACCTCATTTTACTCAACCTGGATATCCTCCAACAAGTGGTTCCCTTCAGAACCCCCCAAGCCATAATCTTATGGTTCGAAATCCCAACCAGTCGCAGTTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGAGACCATGTTGTCAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAATTCGGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1305 0.4927 MRRWLVSEAEAINLFTRIFVSFKTGAVKGNCLHVSICTEKLVHRSVQILRDKQELADTQKELAKLQLAQKESSSSTHSQSNEERSSPTTDPKKTDNASDANNQQLALALPHQISPQQQPAAPPAQAQAPASNVTQAPQQPPYYMPPTPLQNTPVPQNQYLPSDQQYRTPQLVAPQPTPSQVTPTPPVQQFSHYQQQQPQPQQQQQQLQQQQQWSQQVPSPQPPSMQSQTRPPSPAMYPPYQPNQATNPSPAETLPNSMPMQVPYSGVPPPGSSRADTIPYGYGGAGRTVQQQPPPQQMKGSFPAPPSEMYGPTGSLPALPPPGSAYMMYEGEGGRTHHPPQPHFTQPGYPPTSGSLQNPPSHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVVSVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGWSG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14793g00001 434 MobiDBLite consensus disorder prediction 153 175 - -
Vium14793g00001 434 Pfam UBA-like domain (DUF1421) 380 424 IPR010820 -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 224 245 - -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 246 260 - -
Vium14793g00001 434 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 42 434 - -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 113 138 - -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 66 98 - -
Vium14793g00001 434 Coils Coil 48 68 - -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 184 223 - -
Vium14793g00001 434 MobiDBLite consensus disorder prediction 113 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14793g00001 Vium-Chr14793 2999 6163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14793g00001 379 434 Trihelix Transcription Factor Family AT5G14540 40.000 1.11e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14793g00001 - - vum:124822732 718.383