Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1474g00001 ATGCCAATGGCTTCGACTCTCACAATTGTAAGAAATCCCATTTTCCTTACTCACCATTACCAATTCAACAAGCAGTTAACAACACCTTCTTCCTTACGCCTCCTCAGTTTCGCAAAGATGGAAGGAAGTGAGATTAGTGAGGAAGTGGGGGAGGATTCGAGAGCGAAGAGGAAAATTTTTGTTGCTGGAGCCACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTATTGGCAAAGGGTTTTTCTGTTAAGGCTGGGGTTAGGGATTTGGACAAGGCCAAGTCCACCCTTTCCTCTGCCAACCCATCTCTTCAAATTATAAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAAGCCATTGGTGATGATTCAGAAGCAGTGGTATGTGCCACGGGCTTTCGGCCGGGCTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCATGCAGGAAACGTAATGTCAAGAGATTCATTCTTATCAGTTCCATCTTAGTTAATGGAGCATCTATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATCAGGAAATCTGGCATAAACTACACAATTATAAGACCGGGCGGGTTGAGAAATGATCCTCCAACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCGGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTCGTGGAAATTGTGTCTCGCCCAGATGCTGCTAAGCGTTCATACCATGACCTTTTTGGTTCCATAAGGCAGCGATGA 876 0.4475 MPMASTLTIVRNPIFLTHHYQFNKQLTTPSSLRLLSFAKMEGSEISEEVGEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIIKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVKRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSIRQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1474g00001 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 272 IPR036291 -
Vium1474g00001 291 Pfam NAD(P)H-binding 63 260 IPR016040 -
Vium1474g00001 291 Gene3D - 42 281 - -
Vium1474g00001 291 CDD SDR_a5 58 273 - -
Vium1474g00001 291 PANTHER FLAVIN REDUCTASE-RELATED 51 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1474g00001 Vium-Chr1474 2043 4341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1474g00001 56 188 Monolignol Biosynthesis Gene Families AT2G33590 34.507 1.15e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1474g00001 - - gmx:100812074 492.271