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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium14737g00002
ATGGGAAGTAATAGCACTGAAAAGATTCCAATCAATACCAGTACTGAAAGTTCAGAAACCACTATCGAAATAAAGATTAAAACATTGGATTCTCAAACGTACACCCTCAGAGTGGATAAACAGATGCCAGTCCCTGCCCTGAAAGAACAGATTGCTTCTGTAACTGGAGTATTATCTGAAAGGCAACGCCTAATTTGCCAAGGAAAAGTTCTGAAGGATGATCAGCTCCTGTCTGCGTATCATGTTGAAGATGGTCACACCTTGCATCTGGTTGCGAGGCAACCTGACCTACCACCACCAGGAAGTCTGCCCAATCATTCAGTGACTGAACCGAATTCAAGCTCAAGCCTGACAGGCCTCAGTCACAGTAGTCAAGTAGCCCCTGGTGTTTTTATTGAGACTTTCAATGTGCCTTTTCAGGGAGACGGAGTTCCACCTGAAATCAATAGGATCGTTTCTGCAGTTCTAGGATCCATTGGACTTCAAAATTTTGCGAATGGTGAAGGGATTGACGTCAGGGAGCATGATTCCCAAGGCTCTGGGAGAATTTCAGGCTCTAGTGGGATATTTGATTCATCTCATCCTCAACCCGAACAATCGGGTTTTCGGGTTTTGTCTGATAGATCACGTAATGCCTTTGGAGCTCCAGCTACAGTATCTCTAGGGTCTTTGCAGCCTCCTGTCATTCCTGATTCTTTAACAACTTTGTCCCAATATTTAAGTCACATAAGCAATGAATTTGATGCAATTGTGAGAGAAGGGGGGAATATTGCCCAAGCAGACGAGGCTCAAAGGAATATAGAAACTAGACCTGTTTCTTCACGTTCGGGTTCAGTTCTAGAAGGGTTTTCATCTCCGACATTGTTGGCAGAGGTTCTGCTTTCTACCAGACGAATGATTGTTGAACAAGCAGGCGAATGCCTACTTCAAATATCAAGGCAGATGGAGAATCAAGCGGATGTAACTGATCCATTGTTGCGGTCAAGCATTCAGTCTAGGGCTTTGAGGACTGGAGTTTTGTTTTATAACCTTGGTGCATTTTTACTCGAGCTTGGTCGCACAACCATGACACTGCGTTTGGGTCAAACATCGTCTGAAGCTGTAGTTAATGGAGGGCCTGCAGTCTTTATATCCCCAAATGGTCCTAACCATATCATGGTTCAGCCCCTTCCTTTTCAACCTGGAACAAGCTTTGGCGCTGTTCCTGTTGGAGCTGCACAGTCTAGCTCAAGTTTAGGTAGTGGACTTGGTTCAAGCTTTTTCCCTAGGCGTATAGATATACAGATACGACGAGGTACCTCATCAACATCATCCAATACCACCAATCAAGAAGAACGCAATGATACACAACCTGCCTCAGTACAAAGAAATCCAGGTGAAAATCCTGTTAATCAGGCAACCTCCAGGCGTCCAGATGCTTCTTTTTCTGGGGAACCAGGAGTAAGGTTAGTGCCTATTAGAACCATGGTTGCAGCAGCAGTACCGGGTCCCGTGGTCCGTCCGCCTTCAGAATCATCTGGTAATTCTCTAGGTCTTTACTATCCAATTCTTGGGAGATTTCAACATGTGTCGTCTTCTGGACATGTAAATAGTGAACAGAGATCTCAACATTCAAGTCAGCATCATGCTGCAGTGCCATCAACTACTGATTCCATGTTGGAAAGGCAAAGCACAGATGATTCTACAAGGAATGGATCCTTATCAACTCAAAGCACAAGACCGGAGCCATCTAATTCTCGTGTTGTAAATATCAATATTCTGGCTGCCAGTGGACCCCAAAACAACCAAGAACCTGAGCGACAAATACCAAGCAGTGTACTTCAGTTATTAAGGTCACTCTTTCCTGGTGGAGAAATTCATGTGGAAGATTCAAGTGTACAAGGAATAACTCCAGGTTCTGACTCAGATCATGCTGCAACATCAAGGGGGGCTGCCCAAGTCCCCGAAGCACAACCTAATGCCAGTGAAGAAGGAATATTTTTGTCAAATATGCTCCGTGAAATCATGCCAGTCATATCTCAACAAGTAGGGTCAGAGGGAAATCCTTCAGAAGATCATATGGCTCAAGCTTCTTCAACCCAGGTTGAAACTGATGTCGGGACATCACGCAGACCGAGTGATTCTGACTCAAGCCCCCCAAATCCAAAACGTCAAAAGGGTAGTGGTGTACGAGGCTTATGGTTAGCACCAAAATGGAAGCAAGACCAGAGGCGTTGGAACACATGTTTCAAGAATCCATGTGCGACAGAGATAGAGAGGAGAATGAACATGAGCGTATGCAACAAGTTTGGTCTGACATCTCGATGA
2307
0.4486
MGSNSTEKIPINTSTESSETTIEIKIKTLDSQTYTLRVDKQMPVPALKEQIASVTGVLSERQRLICQGKVLKDDQLLSAYHVEDGHTLHLVARQPDLPPPGSLPNHSVTEPNSSSSLTGLSHSSQVAPGVFIETFNVPFQGDGVPPEINRIVSAVLGSIGLQNFANGEGIDVREHDSQGSGRISGSSGIFDSSHPQPEQSGFRVLSDRSRNAFGAPATVSLGSLQPPVIPDSLTTLSQYLSHISNEFDAIVREGGNIAQADEAQRNIETRPVSSRSGSVLEGFSSPTLLAEVLLSTRRMIVEQAGECLLQISRQMENQADVTDPLLRSSIQSRALRTGVLFYNLGAFLLELGRTTMTLRLGQTSSEAVVNGGPAVFISPNGPNHIMVQPLPFQPGTSFGAVPVGAAQSSSSLGSGLGSSFFPRRIDIQIRRGTSSTSSNTTNQEERNDTQPASVQRNPGENPVNQATSRRPDASFSGEPGVRLVPIRTMVAAAVPGPVVRPPSESSGNSLGLYYPILGRFQHVSSSGHVNSEQRSQHSSQHHAAVPSTTDSMLERQSTDDSTRNGSLSTQSTRPEPSNSRVVNINILAASGPQNNQEPERQIPSSVLQLLRSLFPGGEIHVEDSSVQGITPGSDSDHAATSRGAAQVPEAQPNASEEGIFLSNMLREIMPVISQQVGSEGNPSEDHMAQASSTQVETDVGTSRRPSDSDSSPPNPKRQKGSGVRGLWLAPKWKQDQRRWNTCFKNPCATEIERRMNMSVCNKFGLTSR
768
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium14737g00002
768
MobiDBLite
consensus disorder prediction
430
480
-
-
Vium14737g00002
768
MobiDBLite
consensus disorder prediction
675
717
-
-
Vium14737g00002
768
MobiDBLite
consensus disorder prediction
430
472
-
-
Vium14737g00002
768
PRINTS
Ubiquitin signature
32
52
IPR019956
-
Vium14737g00002
768
PRINTS
Ubiquitin signature
53
73
IPR019956
-
Vium14737g00002
768
PRINTS
Ubiquitin signature
74
95
IPR019956
-
Vium14737g00002
768
ProSiteProfiles
Ubiquitin domain profile.
22
97
IPR000626
GO:0005515
Vium14737g00002
768
SMART
ubq_7
22
93
IPR000626
GO:0005515
Vium14737g00002
768
SUPERFAMILY
Ubiquitin-like
16
101
IPR029071
-
Vium14737g00002
768
MobiDBLite
consensus disorder prediction
92
121
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium14737g00002
Vium-Chr14737
1439
14384
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium14737g00002
22
93
Cytoplasmic Ribosomal Protein Gene Family
AT3G52590
37.500
1.91e-08
52.0
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium14737g00002
K23390
-
gmx:100783070
1108.98
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