Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14603g00003 ATGCTGTCTGTTATTCCTTTGGATTTCTCTGTATCTTCAACTCTCACCATATTCTCACATTTCAATATCAGTTTTAAGAAGCCAAACTCTTTCCCTTCCAAGGCTCCACCTTCATCCAATGATTCCTCTCTCCTTTTTCTCTCCAACTCAGGAATTTGCAGGGCTAGTGAAGTTGTTGTTCGCGAGGCAAGGTTAGAAGACTACTGGGAAGTAGCAGAGACTCACTGCAAACGCTTCTTCCCTGAATATTCCTTCCCATTTGATTTTGTGCTCAGAATAGACAGATTGGTGATAGATATGTTATCAGCTATGTTAGCAGCTACGTTAGCAGGATTCTTTAAGCCAAGATACTGCAAGAAAATGTGTTTGGTAGCTGTTATTGGCACCTCACTTGATGAGTCATTTTCATTTGGAAGTGAGGGTCACAAGATTGGTTATTTTTATGGTAAATTCAGTCTCAACAAGGGCTATGTGGTTGGTATATTAACAGTAGACAATATTGCAGACTTTCTACCAAGAAGGGGTCCACAGCGACATAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTTCGTGAAAAATTTCGGAGGAAGGGAATAGCTACAAAACTGATAGAAAAGGCTGAGTCTCATGCCAGAAGTTGGAACTGTCGTGCTATTGCACTGCATTGTGACATGGAAAATCGTTTGGCCACAATGTTTTACAAAGGCCAAGGCTACAAATGTGTCATGGTTCCAGAAGGAGCAAAGTGGCCTCAACCAATGACCTCAACAGATATGAGATTCAACTTCATGATGAAACTTCTGAAAACTTCACCACCTTCTACTCAGACATTTAGTTGGAAATAG 852 0.4085 MLSVIPLDFSVSSTLTIFSHFNISFKKPNSFPSKAPPSSNDSSLLFLSNSGICRASEVVVREARLEDYWEVAETHCKRFFPEYSFPFDFVLRIDRLVIDMLSAMLAATLAGFFKPRYCKKMCLVAVIGTSLDESFSFGSEGHKIGYFYGKFSLNKGYVVGILTVDNIADFLPRRGPQRHRRTGIAYISNVAVREKFRRKGIATKLIEKAESHARSWNCRAIALHCDMENRLATMFYKGQGYKCVMVPEGAKWPQPMTSTDMRFNFMMKLLKTSPPSTQTFSWK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14603g00003 283 CDD NAT_SF 183 224 - -
Vium14603g00003 283 Gene3D - 51 250 - -
Vium14603g00003 283 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 273 - -
Vium14603g00003 283 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 60 248 IPR016181 -
Vium14603g00003 283 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 121 266 IPR000182 GO:0016747
Vium14603g00003 283 Pfam Acetyltransferase (GNAT) family 143 241 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14603g00003 Vium-Chr14603 13013 14414 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium14603g00003 Acetyltransf_1 4.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14603g00003 - - var:108344314 461.07