Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14603g00002 ATGCTGTCTATTATTCCCTTGCATATCTCTGTATCCTCAACTCTCACCAAATTCTCACCTTTCAATATCACTTCTAAGAAATCAAACTCTTTCCCTTCCAAGGTTTCACCTTCCTCCAATGAATTCTCTCTCCTTTCTCTCCACAACTCAGGAATTTGCAGGGCTAGTGAAGTTGCTGATTTGTTCCCAGCAGTGTCCCCGGAAATAATTGTCCGCGAGGCAAGGTTGGAGGACTATTGGGGAGTAGCAGAGACTCACTGCAAGTGCTTCTTCCCTGAATATTCCTTCCCTTTAGATTTTGTGCTCAGGATAGACAGATTGGTGTTGGCTATGTTAGCAGCTATTTTAGCAGGATTATTCAGGCCAAGACACTGCAGAAAAATCTGTTTGGTGGCTGTTATTGGCACCTCGCTTGATGAGTCCTTTTCGTTTGGTAGTGAGGGTCACAAAATTGGTAGTTTTGATGGGAAATTCAGTCTCAACAGGGGCTATGTGGCTGGAATATTGACAGTAGACAATAATGCAGACTTTCTACCAAGAAAGGGGCCAAGGAGACATAGAAGGACTGGAGTTGCATACATATCAAATGTTGCAGTACGAGAAAATTTTCGGAGGAAGGGAATAGCTAAAAAACTGATAGAGAGGGCTGAGTCTCATGCCAGAAGTTGGAGCTGTCGTGCAATTGCACTGCATTGTGACTTGGAAAATCCTGTGGCCACAATGCTATACAAAGGCCAAGGTTACAAATGTGTCATGGTTCCAGAAGGAGCAAAGTGGCCTCAACCAAGAACCTCATCAGATATCAGATTCAACTTCATGATGAAGCTTCTAAAAAATTCTCCATCTTCTAGTTAG 855 0.4316 MLSIIPLHISVSSTLTKFSPFNITSKKSNSFPSKVSPSSNEFSLLSLHNSGICRASEVADLFPAVSPEIIVREARLEDYWGVAETHCKCFFPEYSFPLDFVLRIDRLVLAMLAAILAGLFRPRHCRKICLVAVIGTSLDESFSFGSEGHKIGSFDGKFSLNRGYVAGILTVDNNADFLPRKGPRRHRRTGVAYISNVAVRENFRRKGIAKKLIERAESHARSWSCRAIALHCDLENPVATMLYKGQGYKCVMVPEGAKWPQPRTSSDIRFNFMMKLLKNSPSSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14603g00002 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 281 - -
Vium14603g00002 284 Pfam Acetyltransferase (GNAT) family 163 248 IPR000182 GO:0016747
Vium14603g00002 284 Gene3D - 155 258 - -
Vium14603g00002 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 128 279 IPR000182 GO:0016747
Vium14603g00002 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 265 IPR016181 -
Vium14603g00002 284 CDD NAT_SF 184 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14603g00002 Vium-Chr14603 6876 9601 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium14603g00002 Acetyltransf_1 1.8e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14603g00002 - - gmx:100803930 492.271