Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14535g00001 ATGGGAGAAGATTGTGGAGCCTGGATTCCGGAGCTGCTTTTTGATTGGCAATCTCCCAGTTTGAGCTCCTTCAATGCTGCACCCTTTGGCACGGGGAAGCAAAATGGTACAGCTGCAGCTATGAATCCAGTTGGCAACTCTGTTGCAAGAGATGCTACAATGCCAGCTTATCTGTCCTCTGGGCTGCCTCATTCACAGCCTGGACATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGTTTCCGGCAGGGATTTACTACACCTGCTCGAAACTTCACTGCAGAGGAAAAGCTCTCTGCTAGCCATGCAAAAGGTTTTGGTGAGGAAATTGCCCGGGTTGAGGGTTTCCCGCAGAAGCAATTCCTGGTTATTGATCAAACTGCTGATCAAACAACTCTGGTTTACAGTTCAAGATTTGGTCGGCCTGTTGAGTGCCTGACTCTGTGGGATTCAAAGCTGCATGGTTCTACAAATTTGAACAAGGAGAATGAATTGTCCTCATTGAGGAGAGATGTAAATCATGTGGCTGGACTTGGACCAACTTTGGATGATAAAGTTGATGAAAATCAGGGAACTGATGATGACATTGAAAGTGAGATGCATGAGGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGATAATGATGAAGTTACTAGCACAGGACATTCACCCAGCACAATGACCACTCACGGTAATCAGGAAGAACCTGGTAGATTAACGGCTGAAGAAGTTGCTAGCTCTGTTGGAGAAACAAAGAAGAGAAAGCTGCAGGAGGGGGCTTATGATGGTGACATGCAGTTCATGGACACTGCTAGTTCTCTGGATGGGAAAATACCCTTTGAAGTTGAAGATGATGCAGAATCAAGATGCTCCAGTGTTGGCAACAATAGTAGTAGAGGGTCCGGTCGAATGGGTTCTTGGTCGGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATTCTGCAGTGCATAGTTCCTGGTGGAAAGGGCAAGGACCCAGTTGAACTTCTTGATGAAGCCATACGTTGCTTGAAATCATTGAAACTCAAGGCCATAAAGCTTGGACTTGATATGCCATATAAGTTGGAGAATTAG 1152 0.4514 MGEDCGAWIPELLFDWQSPSLSSFNAAPFGTGKQNGTAAAMNPVGNSVARDATMPAYLSSGLPHSQPGHSGEPHGWFYCLPRFRQGFTTPARNFTAEEKLSASHAKGFGEEIARVEGFPQKQFLVIDQTADQTTLVYSSRFGRPVECLTLWDSKLHGSTNLNKENELSSLRRDVNHVAGLGPTLDDKVDENQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDNDEVTSTGHSPSTMTTHGNQEEPGRLTAEEVASSVGETKKRKLQEGAYDGDMQFMDTASSLDGKIPFEVEDDAESRCSSVGNNSSRGSGRMGSWSGNKKMRKEKIQDVLSILQCIVPGGKGKDPVELLDEAIRCLKSLKLKAIKLGLDMPYKLEN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14535g00001 383 MobiDBLite consensus disorder prediction 234 250 - -
Vium14535g00001 383 MobiDBLite consensus disorder prediction 190 204 - -
Vium14535g00001 383 MobiDBLite consensus disorder prediction 178 275 - -
Vium14535g00001 383 MobiDBLite consensus disorder prediction 303 325 - -
Vium14535g00001 383 PANTHER TRANSCRIPTION FACTOR BHLH145 9 376 IPR037546 -
Vium14535g00001 383 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Vium14535g00001 383 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14535g00001 Vium-Chr14535 17538 21268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14535g00001 75 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.333 7.63e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14535g00001 - - gmx:100812109 568.54