Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14511g00001 ATGGGTGAACTAAAACCATATTTGGCAATGTTTGTGGTGCAATTGATATATTCAGGGCTAACCCTGCTGTCTAAGGCTGTGTTTAACAGGGGAATGAATACCTTTGTGTTCATATTTTATAGACAGCTGATTGGTGCACTTGTTTTGGTTCCTCTGGCCTTCATACTTGAGAAAAAAACAGTAGTGTCAGTGTCACTTTCCTTTTCAACCTTCTGCAAGATTTTTGTGTCTTCATTTTTCGGAGTAACTTTGACTATAAATATGCAAGCTATTGCCCTTGTTTACACGTCTGCCACTTTGGCTGCTGCAATTGTCAATTCTCTCCCCGCATCTACGTTTTTCTTTGCTGTGCTGCTCAGAATGGAGAAGGTAAATATAAGGACAAAAAGTGGAGTTACAAAGATAGCAAGTGTGTTCGTGTGCCTGGTTGGTGTAGCCACCCTTGCTTTTTACAAGGGACCACAGTTAAGGATTGCTCATTACTACAATGATAAGAGTCCACATCATGAGGATCATTTTTCATCCAGCAAAAGATGGGTATTAGGCTCTGTAGTCTTGTTCATAAGCGTCATCATCTGGAGCATTTGGCTCGTAATTCAGGCTCAAATTCTTAAAAGCTACCCTGCAAAGCTGAAGTTCACGAGCCTTCAGTGCCTGTCAAGTTCAATCCAATCATTTTGTATTGCTATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGTTGGGACATGAAACTGCTTGCAGTTGTTTACTGTGGGACACTAGTGACTGGACTCATCTACTACTTGCAAGCTTGGGCTATCCAAAAGAGAGGACCAGTTTTTCCTGCGATGTGGAACCCGCTAAGTTTTGTCATTGCTACCACGGGTTCTATATTTCTCTTGGGCGAGCCCCTACTTTTGGGAAGGTCAGAGTTACAATGCTTCGGATAC 936 0.4209 MGELKPYLAMFVVQLIYSGLTLLSKAVFNRGMNTFVFIFYRQLIGALVLVPLAFILEKKTVVSVSLSFSTFCKIFVSSFFGVTLTINMQAIALVYTSATLAAAIVNSLPASTFFFAVLLRMEKVNIRTKSGVTKIASVFVCLVGVATLAFYKGPQLRIAHYYNDKSPHHEDHFSSSKRWVLGSVVLFISVIIWSIWLVIQAQILKSYPAKLKFTSLQCLSSSIQSFCIAIAFERDIEQWKLGWDMKLLAVVYCGTLVTGLIYYLQAWAIQKRGPVFPAMWNPLSFVIATTGSIFLLGEPLLLGRSELQCFGY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14511g00001 312 PANTHER WAT1-RELATED PROTEIN 6 303 IPR030184 GO:0016020|GO:0022857
Vium14511g00001 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Vium14511g00001 312 Pfam EamA-like transporter family 182 301 IPR000620 GO:0016020
Vium14511g00001 312 Pfam EamA-like transporter family 5 133 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14511g00001 Vium-Chr14511 2466 4033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14511g00001 1 253 Nodulin-like Gene Family AT5G64700 51.923 3.43e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14511g00001 - - vum:124822595 594.734