Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14438g00001 ATGGCCACATTTGGCGCGCAAGGTGTTCGTCCTCCTCCATTGACATCCACCTCCGATCAACCTCCTCTTTTTGATGGCACCACCAGGTTGTACACCAGTTATGGTTGCCCCTATGCACAACGTGTATGGATCACTAGGAACTACAAGGGGCTACAAGACAAGATCCATTTGGTCCCTATAAACCTTCAAGACAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCATTGGAGCACAATGGCAAGGTTCTGGGAGAAAGTCTTGATTTGATCAAGTATGTAGATGTCAACTTTGAAGGGACACCTTTGTTTCCCACTGATCCTGCCAAGAAAGAGTTCGGTGAGCAACTGATATCCCATGTTGATACATTCACCAGAGACCTGTTCGTTTCATTGAAAGGAGATGCTGTACAAGAAACCAGTTCTGCTTTTGGATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGTCAGTTAAGTTTGGTAAGTTGA 522 0.4502 MATFGAQGVRPPPLTSTSDQPPLFDGTTRLYTSYGCPYAQRVWITRNYKGLQDKIHLVPINLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDVNFEGTPLFPTDPAKKEFGEQLISHVDTFTRDLFVSLKGDAVQETSSAFGYLENALGKFDDGPFLLGQLSLVS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14438g00001 173 MobiDBLite consensus disorder prediction 1 22 - -
Vium14438g00001 173 SUPERFAMILY GST C-terminal domain-like 103 169 IPR036282 -
Vium14438g00001 173 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Vium14438g00001 173 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 172 IPR044629 GO:0004364
Vium14438g00001 173 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Vium14438g00001 173 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Vium14438g00001 173 Gene3D Glutaredoxin 1 104 - -
Vium14438g00001 173 Gene3D - 105 173 - -
Vium14438g00001 173 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14438g00001 Vium-Chr14438 7273 8514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14438g00001 10 172 Glutathione S-transferase Gene Family AT5G02790 71.166 1.62e-85 249