Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium1442g00006 ATGACTGCAATGAAATGTAATTTTCAACCTTATGGTAAAGATTTTGGTAGAGGAAATGAACCAACTGGGAGGTTCAGCAATGGTTTAATCCCTTCAGATTTCATTGCTGAAAAGTTACATCTCAAGAAGCTTTTGCCTCCCTATCTTGATCCAAATTTGAAACGTGAAGATCTTCTCACTGGTGTCAGCTTTGCATCTGGTTCCAGTGGATATGATCCTCTAACTTCTAAACTAGCAGTAACTGATTACTCTCACCTAAAACCTTACAGTATCTTTTCATTCTCCCCTTCATATCTTTTAACACTCACTATAATTTTCTTTCTGTCATATGTTCCTCAGTTAGTGATATCATTATCAGATCAACTAGACAAATTCATGGAATACAAAACCAAGATACATGACTTGGTTGGAGAAAAAAAAGCAACAACAATTATATCGAAAAGCATATACATCTTGAGTTCAGGAAGCAATGATATTGCCAATAATTTCTTTTCGTTACCATTTAGGAAACTACAGTATAATATTGCAACTTACACAGATTTCTTGGTTTCAGAAGCTACCAAATTCTTACAAGATCTTTATGGACTTGGAGCTAGAAAGATTGGAGTACTTGGTTTGCCAAATTTAGGGTGTCTGCCTTCTCAAAGAACACTCAGAGGAGGATTTCTCAGGACATGTTCAGATCCTGAAAACCAGGCTGCAATGCTCTTTAACAAGAAGCTAACATCCCAAATAGATATCCTTGGGAAAATATTTCCTGATGCTAAATTTGTCTACATTGATATTTACAGTAAATTATTGGATATGGTTCAAGATCCCACTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACGGGAGATCTTGAAGTAGGCGTTCTATGTAACCCTCTTACCTTGGGGACATGTTCAAACAGGTCAAATTACATATTTTGGGACAGTTTCCATCCTACGGAAAGGGCATATAATATTATTTCTTCTGAGGCGTTTGATAAAAACTTCAATAAATTCTTCTAA 1023 0.3578 MTAMKCNFQPYGKDFGRGNEPTGRFSNGLIPSDFIAEKLHLKKLLPPYLDPNLKREDLLTGVSFASGSSGYDPLTSKLAVTDYSHLKPYSIFSFSPSYLLTLTIIFFLSYVPQLVISLSDQLDKFMEYKTKIHDLVGEKKATTIISKSIYILSSGSNDIANNFFSLPFRKLQYNIATYTDFLVSEATKFLQDLYGLGARKIGVLGLPNLGCLPSQRTLRGGFLRTCSDPENQAAMLFNKKLTSQIDILGKIFPDAKFVYIDIYSKLLDMVQDPTKYGFEVADKGCCGTGDLEVGVLCNPLTLGTCSNRSNYIFWDSFHPTERAYNIISSEAFDKNFNKFF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium1442g00006 340 PANTHER GDSL ESTERASE/LIPASE EXL3 115 329 - -
Vium1442g00006 340 Gene3D SGNH hydrolase 1 335 IPR036514 -
Vium1442g00006 340 FunFam GDSL esterase/lipase APG 107 336 - -
Vium1442g00006 340 Pfam GDSL-like Lipase/Acylhydrolase 16 330 IPR001087 GO:0016788
Vium1442g00006 340 CDD SGNH_plant_lipase_like 1 335 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium1442g00006 Vium-Chr1442 36856 38182 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium1442g00006 1 330 Pollen Coat Proteome AT1G75910 35.821 7.12e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium1442g00006 - - vum:124826430 677.167