Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14392g00001 ATGCTAGGGAAAAAGATGGTATCTTTGAAGAAACTAGCGAAGAAAGTGAAGGCTGTCGGTGGCGCTGAGCCAGAGCCTGATACTCTCTACCAAGAATGTTTGCTGAAGGGGTATGAAGAGGAAAAGGAATCTGGGTCTGGCGTAACCCCAACTGGTTTTTTAGCACTTTACGTTGGTGATGAACGGCAGAGATATGTGGTCCCAACCAGCTACCTTTCCCACCCTCTATTCAAGATGCTGCTGGAGAAGGCCTACAATGAATTTGGCTTTGCTCAGAGGAATGGCCTAGTGGTTCCATGCTCTGCTTCAACATTTCAAGAGGTGGTGAATGCTATTGAATGCAACAATGGCAAGTTTGACTTAGGAAAACTTTTTGAAGATTTTGCTTAA 390 0.4487 MLGKKMVSLKKLAKKVKAVGGAEPEPDTLYQECLLKGYEEEKESGSGVTPTGFLALYVGDERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSASTFQEVVNAIECNNGKFDLGKLFEDFA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14392g00001 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 108 IPR003676 GO:0009733
Vium14392g00001 129 Pfam Auxin responsive protein 31 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14392g00001 Vium-Chr14392 2782 3550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14392g00001 50 115 Calmodulin-binding Proteins AT5G20810 54.545 2.30e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14392g00001 K14488 - gmx:100790208 198.749