Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14383g00001 ATGGCAGCAGCCCTAGTAGGTGGTGCACTCCTTTCTTCCTTCCTTAACGTTCTTTTTGAGAGGCTGGCTACCCGTGAATTTGTAAACTTCATCCGTGGAAAGAAAGCTGACAAGTGGCTTCAAAAGATGAAGAACCAGCTGCTAGTCGTTAAAGTTGTGCTTGATGATGCTGAGAAGAAACAAATCACAGACTCCAATATCAAAGAGTGGCTCGATCTTCTCAGTGATGTTGTCTACGAGGTGGACGACATACTTGATGAAGTTTCTACTAAAGCTGCTACTCAAAAGAAGGTAAGTTATTCCTTTTGTGACCTTTTTAAAAAGAAAAAAATTGTTAGTAAGTTGGAAGACATTGTTGGAAGATTAGATGACATTTTAAAACAAAAGGAGAGTCTCGGTTTGAAGCTGAATGAAGCGGAGAACGATCAGCCACCGGAACCTCAGCCAACATCACTGGAAGGTAGATATGGTATGTACGGTAGGGATGAAGACAAGGAGGCCATAATGAAGTTGGTGTCAGAGGATAGCAGTGATAGTGAAGCAGTGTCTGTGATCTCTATTGTAGGCATGCCTGGGGTTGGAAAAACAACTTTGGCACGATCTGTGTATAACGATGACAAATTGACTCAGATATTTGATTTAAAGGCATGGGTTCGTGTTTCTGATAGATTTGACATTGTGAAGGTCACAAAAGCTATGCTAGAGGAAATTACTCAAAAGCCTTGTACATTGAGTGATCTGAACTCAATTCAACATGACTTGTTGGACAAACTGAAGGGTAAGAGATTCTTGATTGTCTTAGATGATGTTTGGATCGAGGATTGTGATGTCTGGAGTAGTCTTACAAAACCATTTCTAAGTGGGATTAGGGGAAGCAAAGTTCTTGTCACAACTCGCAATGAAAGTGTAGCGGCTGGAGTCCCTTTTCATAGTGCTAAATATGATCTAAAGATATTGTTAGATGAAGATTGTTGGTTGGTGTTTGAAAGCATTGCATTTCCTCTGTCAGAAGTCAGTGAGAATAGAGGAACTCTAGAAAATATTGGAAAAAAGATTGTTCAAAAGTGCGATGGGTTGCCGTTAGCTGCACAATCACTTGGAGGAATGTTGAGAAGAAAGCACGATATTAGGGATTGGAATAATGTACTTGAAAGTGACATTTGGGCACTTCCTGGAAGTATCATTCCAGCTCTCAGAATCAGTTATAATCATCTCCCTCCACATTTAAAACGGTGTTTTGTGTATTGCTCCCTTTACCCCAAAGATTTTGAATTTAGAAAAGATGAACTGATCCTGCTGTGGATGGCTGAAGATCTTATAAAAACACCAAGAAAAGGAAAGACTTTAGAAGAAGTTGGCCACGACTATTTTGACGATTTGGTTTCAAGATCGTTTTTCCAATGTTCAACTTATCAGGCTTTGGGTAAATATTTTGGTAATCGTTATGGTAATTGTTTTGTGATGCATGACCTCATGCATGATCTAGCAACTTTCCTTGGCGGGGAATTCTATTTCAGAGCAAATGAACTTGGAAAAGAAACCAAAATAGATATAAAGACTCGTCATTTGTCGTTTAGAAGATTCAGTGATCCTGTCTCGGATATTGAGGTTTTTGATACAGTCAAGTTTCTAAGAACTTTCTTGCCGATCAATTATGAAGATTCTCCATTCAACAACGAGAAGGCACCATGTATTATAGTGTCCATGCTTAAGTACTTGAGAGTTTTATCATTTCGTGCATTCCAAAGTCAGCTTTATCTGCCTGATTCAATAGGTGAATTGATCCATTTGCGTTATTTAAATCTCTCTAGTACAAGCATAGCAGCACTTCCGGAGTCATTGTGTAATTTGTACAATCTACAGACTTTAAAGTTGTATGGTTGCTCAAATCTGACTAAGTTGCCAAGAGCCATGCAAAATCTGGTAAACTTGCGTCATCTTATAATTCTTAATACTCCCATAGAAGAGATGCCTCATAGAATGGGGAAACTAAATCAATTACACAACTTGGATTGCTATACTGTGGGCAAGCATAAAGAGAATAGCATCAAAGAACTGGGAGGACTTCCAAATCTCCATGGTTGGTTTTGTGTTCAGAAATTAGAGAATGTCACTACAGGTGAAGAAGCACTAGAGGCAAGGATAATGGATAAGAAGCATATTTACCATTTATCCTTGGAATGGTCTGAGCGTAATGACAATAGCATCGACTTCCAAATTGAATTAGATGTACTCGGTAAGTTACAACCTCACCAAAACCTGGAATCGCTTTCAATAAACGGTTATCAAGGAACACGATTTCCCGAATGGATGAGAAACTTTTCCATCCCAAATATAACCAATCTATATTTAACAAATTGTAGCAATTGTTCCAAGCTTCCTTCACTTGGCCAACTACCATCTCTCAAGCTCCTCCGTATTTCAGAGATGAATTCAGTGAAGACTATTGATGCATCCTTTTATAAGGAAGATTGTTCATCTCTGACGCCCTTTCCCGCCCTTCAATCTCTACACATTGTTCGCATGCCTTATTGGGAGGTGTGGAGTTCCTTTGTTTCAGAAGCTTTTCCTGTGCTTAATGATCTTCTTATAAGTGAGTGCCCCAATCTAAGGGGAGATTTTCCAGATCACCTTCCTGCTCTGCAGACACTCGTCGTTACAAATTGCGACCTTCTTGTCTCTTCTGTACAAAGGGCTCCCACCCTTCGAACATTAGAGATATATAAAACCAACAAAATAGTGTTTCATGAGTTTCCTCTTTTGGTAGAGACCATAGAGATAGAAGGAAGGCCAATGGTGGAGTCCATGATGGAGGTAATCACCAGCATCCAACTTCCTTGCCTCCATTACTTGTCATTACAGGATTGTTCGTTAGCCCTGTCTTTTCCTGGTGATTGTCTTCCAGCATCGTTGAAAACTCTTGATATCAGTGGTTTAAGCAATCTCAAGTTCCCGATGTTACACAAACACAAATTACTGGAATCACTGTCAATAAATAACAGTTGTGATTCGCTCAAGTCTCTTCCACTGGTTAACTTTCCAAATCTTATTAGTCTTCAAATCAGAAACTGTGAAAATTTGGAATCTCTTCTGATCTTAAGGTCAGAGTCGTTGAAGAGTCTTAATTCTTTTGAGCTTGGGGACTGCCCCAACTTTGCGTCATTCCCAGAAGAAGGATTTTCTGCGCCCAATTTGACTCGTTTCAGTGTTTATGGTTGTGTTAAGTTGAATTCATTGCCCTACCAGATGGAAACTCATCTCCCAAAGATGGAATATCTTAGCATATCCAACTGCCAACAAATTGAGGGGTTTCCTGAAGAGGGTATGCCACCTAACTTGACAACAGTTAAGATAAGGAATTGTGAGAAACTACTTAGCAGCCTAGAATGGATATCGATGGTCATGGTTACCTCTCTCAAAGTCTGTGGTCCATGTGATGGCATGAACTCCTTCCCAAAGGAGGGTTTGCTACTTCCCTCCCTCACCTCTCTGCATCTATGTGATTTCTCAAGTCTAGAGACATTGGACTGCAAGGGCATTCTCCATCTCACGTTGCTACAAGAATTGCACATTGAAAATTGTCAAAAGTTAGAGAATATCGTGGGAGAAAGGCTGCCTGTCTCTCTGATAAAATTAAGAATAGAGGGATGTCCCTTGCTGCAAAAACTATGCCACAGAAAGCACCGTAAAATTTGGCCTAAAATCTGCCATGTTCGTGGGATAAACATTGACGGTAGATGGATTTAG 3747 0.3998 MAAALVGGALLSSFLNVLFERLATREFVNFIRGKKADKWLQKMKNQLLVVKVVLDDAEKKQITDSNIKEWLDLLSDVVYEVDDILDEVSTKAATQKKVSYSFCDLFKKKKIVSKLEDIVGRLDDILKQKESLGLKLNEAENDQPPEPQPTSLEGRYGMYGRDEDKEAIMKLVSEDSSDSEAVSVISIVGMPGVGKTTLARSVYNDDKLTQIFDLKAWVRVSDRFDIVKVTKAMLEEITQKPCTLSDLNSIQHDLLDKLKGKRFLIVLDDVWIEDCDVWSSLTKPFLSGIRGSKVLVTTRNESVAAGVPFHSAKYDLKILLDEDCWLVFESIAFPLSEVSENRGTLENIGKKIVQKCDGLPLAAQSLGGMLRRKHDIRDWNNVLESDIWALPGSIIPALRISYNHLPPHLKRCFVYCSLYPKDFEFRKDELILLWMAEDLIKTPRKGKTLEEVGHDYFDDLVSRSFFQCSTYQALGKYFGNRYGNCFVMHDLMHDLATFLGGEFYFRANELGKETKIDIKTRHLSFRRFSDPVSDIEVFDTVKFLRTFLPINYEDSPFNNEKAPCIIVSMLKYLRVLSFRAFQSQLYLPDSIGELIHLRYLNLSSTSIAALPESLCNLYNLQTLKLYGCSNLTKLPRAMQNLVNLRHLIILNTPIEEMPHRMGKLNQLHNLDCYTVGKHKENSIKELGGLPNLHGWFCVQKLENVTTGEEALEARIMDKKHIYHLSLEWSERNDNSIDFQIELDVLGKLQPHQNLESLSINGYQGTRFPEWMRNFSIPNITNLYLTNCSNCSKLPSLGQLPSLKLLRISEMNSVKTIDASFYKEDCSSLTPFPALQSLHIVRMPYWEVWSSFVSEAFPVLNDLLISECPNLRGDFPDHLPALQTLVVTNCDLLVSSVQRAPTLRTLEIYKTNKIVFHEFPLLVETIEIEGRPMVESMMEVITSIQLPCLHYLSLQDCSLALSFPGDCLPASLKTLDISGLSNLKFPMLHKHKLLESLSINNSCDSLKSLPLVNFPNLISLQIRNCENLESLLILRSESLKSLNSFELGDCPNFASFPEEGFSAPNLTRFSVYGCVKLNSLPYQMETHLPKMEYLSISNCQQIEGFPEEGMPPNLTTVKIRNCEKLLSSLEWISMVMVTSLKVCGPCDGMNSFPKEGLLLPSLTSLHLCDFSSLETLDCKGILHLTLLQELHIENCQKLENIVGERLPVSLIKLRIEGCPLLQKLCHRKHRKIWPKICHVRGINIDGRWI 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14383g00001 1248 FunFam Probable disease resistance protein At1g61300 150 311 - -
Vium14383g00001 1248 MobiDBLite consensus disorder prediction 136 156 - -
Vium14383g00001 1248 Gene3D - 11 125 - -
Vium14383g00001 1248 Gene3D Ribonuclease Inhibitor 550 938 IPR032675 -
Vium14383g00001 1248 Pfam NB-ARC domain 164 384 IPR002182 GO:0043531
Vium14383g00001 1248 Gene3D - 319 400 IPR042197 -
Vium14383g00001 1248 Gene3D - 148 309 IPR027417 -
Vium14383g00001 1248 Gene3D - 401 497 IPR036388 -
Vium14383g00001 1248 FunFam Probable disease resistance protein At1g63360 402 498 - -
Vium14383g00001 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Vium14383g00001 1248 Coils Coil 40 60 - -
Vium14383g00001 1248 SUPERFAMILY L domain-like 940 1234 - -
Vium14383g00001 1248 CDD RX-CC_like 13 125 IPR038005 -
Vium14383g00001 1248 SUPERFAMILY L domain-like 487 905 - -
Vium14383g00001 1248 Pfam Rx N-terminal domain 11 97 IPR041118 -
Vium14383g00001 1248 Coils Coil 122 142 - -
Vium14383g00001 1248 PRINTS Disease resistance protein signature 615 631 - -
Vium14383g00001 1248 PRINTS Disease resistance protein signature 257 271 - -
Vium14383g00001 1248 PRINTS Disease resistance protein signature 184 199 - -
Vium14383g00001 1248 PRINTS Disease resistance protein signature 356 370 - -
Vium14383g00001 1248 Gene3D Ribonuclease Inhibitor 939 1238 IPR032675 -
Vium14383g00001 1248 PANTHER DISEASE RESISTANCE PROTEIN RP 41 859 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14383g00001 Vium-Chr14383 7764 11630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14383g00001 155 414 WRKY Transcription Factor Family AT5G45050 24.906 3.01e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14383g00001 - - vun:114165446 1801.95