Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14307g00001 ATGATTACGGCAGTGTTTTTATCTGTGGGTTTGAACACTCTGGTGAAAGCAAACCTGTCCAGTGGCATGAGCAATTTCGTTTTCGCTGCTTATTCCAACCTCTTCGGATTCTGTTTCCTGCTAACCGCAACAACCCTTCGTTACAGAAACAGATCTCCCCCACCGCTCAATAACTCCATTGTCTTCAGAGCTTTTCTCCTTGGCTTCTTGGGTGTTTTCATTCAAACGCTCTTTTATATTGGCCTTGGATATGGCTCCCCCACTCTCAGCTCAGCCACAGAAGATCTCATTCCAGCTTTCACTTTCATAATCGCCGTTGTTTTCAGGATGGAAAAGCTGGACCTAAAACTAAGAAGCAGTCAAGCAAAAACCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAACGGTGACTTTATACAAAGGTTTGCCTATAACAACTCATGTGATGCGACACAACTTATTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATGTATCCTATCAACTGCTACCTTTACTGCTTCAGTCTTAATTGTTATTCAGGTAAATAGCTTTAACTACCCATTCAAACTATAA 585 0.4239 MITAVFLSVGLNTLVKANLSSGMSNFVFAAYSNLFGFCFLLTATTLRYRNRSPPPLNNSIVFRAFLLGFLGVFIQTLFYIGLGYGSPTLSSATEDLIPAFTFIIAVVFRMEKLDLKLRSSQAKTIGTVVSIAGALTVTLYKGLPITTHVMRHNLFLSSQQSQWLLGGCILSTATFTASVLIVIQVNSFNYPFKL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14307g00001 194 Pfam EamA-like transporter family 4 138 IPR000620 GO:0016020
Vium14307g00001 194 PANTHER WAT1-RELATED PROTEIN 1 191 IPR030184 GO:0016020|GO:0022857
Vium14307g00001 194 SUPERFAMILY Multidrug resistance efflux transporter EmrE 33 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14307g00001 Vium-Chr14307 659 4289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14307g00001 8 184 Nodulin-like Gene Family AT3G28050 44.199 4.27e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14307g00001 - - vum:124822465 371.318