Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium142g00013 ATGGTGAATGGAGGGTTGGTGGAAGATGTTGCAGTGATTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGGAAACGCTTTGTTGCTCAGTTATCTTATGTCTTTGGGCCTCGAATCTCTTACCATTGTCACTTTTACTTCCTTTGCTACGTTCCTTATTCTCTTACCCTTTGCCTTCTATTATGAAAGGGTAACAATGTTCCAGTCTCTATTCCTAAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACAGCCATGCCAAATCTTGCACCAGGTCTCATCTTCATCATGGCATGGATTTTTCGGTTGGAAAAAGTAAAGTTAAGCTGCACATATAGTAGAGTAAAAATAGTTGGCACGTTGCTTTGTGTATTAGGAGCTCTCACACTGAGCATAATGCAAAGCATCTCTGCACCTCATAAGTCCAATAAAGTGGGAACAATTCAATCACCATCTCCACCGACACATGTAACATTTGACAGACACAAACTAATCGGTTGTCTCTATCTTTTGGTCGCAATCCTCATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTAGGAGATTTTCCTGCACCGATGTCGTTGTGTTCAATAACTTGCTTTTTTGGGACATTCATGACTGTCGCAGTTCAATTAATTGAAGATCACGAATTCAAAACTGGTTGGCCTATTGTGAGTGTCGGAGACATGATTGGATATTCTCTTCTGGCAGGTGTAGTGAGTGGAATGTGCCTGACTGTGAATTGTTGGGCACTTGAGAAAAGAGGGCCAGTGTTGGTGTCCATGTTCAGTCCTATTGGTACAGTCTGCTCAGTAATTTTCTCAGTTGTTACTCTAGGACACACCACCAACATTGGAAGCTTAGCAGGTATGTTCCTGATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGTTGCTTTGAGAGTGAATATGACGCAGAGAAGCCCCTTTTAAGTTAA 981 0.4261 MVNGGLVEDVAVIGGLIGVQFVYAGNALLLSYLMSLGLESLTIVTFTSFATFLILLPFAFYYERVTMFQSLFLKGINLTSPAMGTAMPNLAPGLIFIMAWIFRLEKVKLSCTYSRVKIVGTLLCVLGALTLSIMQSISAPHKSNKVGTIQSPSPPTHVTFDRHKLIGCLYLLVAILILSSNIVLQAFTLGDFPAPMSLCSITCFFGTFMTVAVQLIEDHEFKTGWPIVSVGDMIGYSLLAGVVSGMCLTVNCWALEKRGPVLVSMFSPIGTVCSVIFSVVTLGHTTNIGSLAGMFLMFTGLYFVLWAKGKEGCFESEYDAEKPLLS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium142g00013 326 Pfam EamA-like transporter family 166 305 IPR000620 GO:0016020
Vium142g00013 326 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 309 - -
Vium142g00013 326 PANTHER WAT1-RELATED PROTEIN 15 312 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium142g00013 Vium-Chr142 48402 51217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium142g00013 6 317 Nodulin-like Gene Family AT5G47470 54.328 2.23e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium142g00013 - - gmx:100809182 536.569