Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14286g00003 ATGGCACCCTTCATCATCTTCAAGTCCAAGCTTCAATCTAGAGTACTTGTTCTTGTCCTCAACTTGGCTTTCGTCTTCCTCTTCTGTCTACTTCTCAACCTTTATCTCCACCCTCCTAACGAAAATTCTCAAGGCCACTCCAATGCCTCTTTCCTCTCAATCTTCAACCATGCAAGGCTCTTCAGAGATGTCAGCGTTGAAGGCTGCACTGATATACACAAGTATTCAGATTTTGACTCCAAGTGTTTGTATGTCAGAACTAATCTCGAGTGCAGTTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCAGGAGTGACCCTTCTTTCTCTGGGAAATGGCGCTCCTGATTTCTTTGCCAGCGTTGTGTCTTTCTCAGGATCATCCAGCAACGGTGCCGTAGGACTCAACAGCATCCTAGGAGGTTCTTTCTTTGTGTCGTGTGTTGTCTTGGGGGTCATAAGCATTCTGGTTAGCCCAAATCAGGTTGAGGTTGAAAAGGCCAGTTTCATCAGGGATGTCCTTTTCTTCCTTCTCTCTCTTTTCATCCTCCTTATCATAATTTACATCGGTAAAATCACTTTGTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCCGTCTCAGCCACACATCTCATATACGGAGGGGACACAACAAATGCAAGGCAATATTCAATGTCTTCTGAGGAATCATCAGCGCCTAGCATACCTTTGTTGGGCTATGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGACCAAAAGCCAGCCAGTACTTTCGGTGATAAGTCATTCTTTGGTTGCCTCTACTTTGGAAAGTTGCTACAAGTGGTAGAACTACCTCTTTGCTTACCAAGAAGGCTTACAATTCCTGTGGTGAGTGAGGAGAAGTGGTCAAAGCCATTTGCAGTAATATCTGTCACATTAGCACCAGTTTTACTTGCAGTTCTTTTCAACACTCAAGGTGAAAACGTGGCTTCAAGGAGTAGCCTGGTTACATACATAGTAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGATAGGTGTAGCCCACCAACCAAGTCCTTGTTTCCTTGGTTAGCTGGTGGCTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGCCGAGCTAGTTTCTGTCTTGGTTTCAATTGGGAGCATAATTGGGGTTAGCCCTTCAGTGCTAGGACTAACTGTCCTAGCTTGGGGGAACTCACTTGGGGACTTCATAGCCAATGGTGCCATGGCCTTAAATGGTGGGGCAGATGGTGTTCAAATGGCCATATCCGGTTGCTACGCTGGTCCAATGTTCAATACCTTGATGGGTTTGGGGTTACCCCTTGTTCTCTCAGCTTTGTCTGATCATCCAGACCCTTATGTGATTCCCAAGGATCCTTCACTGTATGAGACAATTTTGTTCTTGATGGGAGGGCTTCTTTGGGCACTTGTGATCTTGCCAAAGAAGAGTATGAGGTTGGATAAATCCTTAGGGGTAGGGCTTCTAAGTGTTTACCTCTGTTTTTTGGTTATAAGGATTGCTCTGGCTTTTGGGGTTGTGAAATTCTAG 1632 0.4504 MAPFIIFKSKLQSRVLVLVLNLAFVFLFCLLLNLYLHPPNENSQGHSNASFLSIFNHARLFRDVSVEGCTDIHKYSDFDSKCLYVRTNLECSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFSGSSSNGAVGLNSILGGSFFVSCVVLGVISILVSPNQVEVEKASFIRDVLFFLLSLFILLIIIYIGKITLFASICYVSIYFLYVCAVSATHLIYGGDTTNARQYSMSSEESSAPSIPLLGYVDEEKQSLAEIVVVEDKDQKPASTFGDKSFFGCLYFGKLLQVVELPLCLPRRLTIPVVSEEKWSKPFAVISVTLAPVLLAVLFNTQGENVASRSSLVTYIVAALIGIVLGNMACVTTDRCSPPTKSLFPWLAGGFAMSVTWTYIIAAELVSVLVSIGSIIGVSPSVLGLTVLAWGNSLGDFIANGAMALNGGADGVQMAISGCYAGPMFNTLMGLGLPLVLSALSDHPDPYVIPKDPSLYETILFLMGGLLWALVILPKKSMRLDKSLGVGLLSVYLCFLVIRIALAFGVVKF 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14286g00003 543 Gene3D - 316 535 IPR044880 -
Vium14286g00003 543 Gene3D - 103 233 IPR044880 -
Vium14286g00003 543 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 91 542 - -
Vium14286g00003 543 Pfam Sodium/calcium exchanger protein 381 534 IPR004837 GO:0016020|GO:0055085
Vium14286g00003 543 Pfam Sodium/calcium exchanger protein 87 215 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14286g00003 Vium-Chr14286 22183 24477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14286g00003 91 542 Antiporters AT5G17860 51.528 1.41e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium14286g00003 K13754 - gmx:100811635 779.245