Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium14262g00001 ATGGATGGTTTGACCCGGACAGATGAACTGGTTTTTGTCTTGGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTACGACGTCTTGAGAAGCGTATCCTTGTACCACTTCCAGAACCAGTAGCGAGGAGAGCAATGTTTGAGGAACTCCTTCCTGTGCAGCCTGACGAGGAACCGATCCCCTATGATTTGCTTGTGGATCAGACAGAAGGATTTTCTGGGTCAGATATCCGATTACTCTGTAAAGAAACAGCAATGCAGCCCTTGAGACGCTTGATGTCACAACTTGAGCAGAGACAGGAGGAGGTGGTTCCTGAAGATGAGTTGCCAAAAATTGGGCCAATCAGATCTGAAGATATAGAAATTGCATTAAGAAACACAAGACCATCAGCTCATCTCCATGCCCACAAATACGACAAGTTCAATGCTGATTATGGTAGTCAAATACTACAATGA 462 0.4567 MDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPVQPDEEPIPYDLLVDQTEGFSGSDIRLLCKETAMQPLRRLMSQLEQRQEEVVPEDELPKIGPIRSEDIEIALRNTRPSAHLHAHKYDKFNADYGSQILQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium14262g00001 153 PANTHER AAA DOMAIN-CONTAINING 1 149 - -
Vium14262g00001 153 Gene3D - 1 143 IPR027417 -
Vium14262g00001 153 Pfam AAA+ lid domain 66 102 IPR041569 -
Vium14262g00001 153 Gene3D - 40 129 - -
Vium14262g00001 153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 134 IPR027417 -
Vium14262g00001 153 FunFam Katanin p60 ATPase-containing subunit A-like 2 40 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium14262g00001 Vium-Chr14262 13902 15248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium14262g00001 1 97 Calmodulin-binding Proteins AT3G56690 36.000 1.51e-09 53.5